Pairwise Alignments

Query, 490 a.a., Outer membrane protein assembly factor YaeT precursor from Xanthomonas campestris pv. campestris strain 8004

Subject, 465 a.a., outer membrane efflux protein oprM precursor (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  200 bits (509), Expect = 8e-56
 Identities = 142/455 (31%), Positives = 215/455 (47%), Gaps = 28/455 (6%)

Query: 28  DAPLPDRYLAQDAAEQRSAAAPVDLSRWWAGFGDPALDRYVTAALAQNLDLAQAAARVTQ 87
           + PLP  +  +++ E      PVD   WW  F D  LD  +  A+ +N  +A A  R+  
Sbjct: 29  NTPLPKEW--EESGEVFQQTLPVD-DHWWKSFQDTRLDSLIALAVDRNYSVAMAINRIAA 85

Query: 88  ARAGLGAANAALLPSGSINGQATRTYQSLETPLGQVLRNTPDFDRYASVYDATANASWEI 147
           ARA L A      PS  +N   TR   S     G         D Y   YDA  + SWEI
Sbjct: 86  ARANLWAERGNFFPSIGLNAGWTRQETS-----GNTSTLPQSTDHY---YDAALSMSWEI 137

Query: 148 DVFGGLRRGRQAALADYQASAAGAAATRLAVAAQTADTYISIRGLQARLAVAQRQVATQQ 207
           DVFG +R+  +A   ++ AS    AA  +++A++ A  YI++R LQ  L V  + VA+Q+
Sbjct: 138 DVFGSIRKRVKAQKENFAASKEEYAAVMVSLASEVASAYINLRELQQELEVVNKNVASQE 197

Query: 208 QLLAMVTLLQGKGLAADLQVHQAQGALTQAQAGVPALETALTAAMNALDVMLGATPGTHR 267
           ++L +  +    GL A L V QA+  L   +A +P LE  +   +  L V+LG  P   R
Sbjct: 198 EVLKITEVRYNTGLVAKLDVAQAKSVLYSTKASIPQLEAGINQYITTLAVLLGMYPQEIR 257

Query: 268 AELVASTPIPTAPQVTGAASPGDLLRRRPDLIVAERRLAVANARIGVAMAEYYPKFSLSG 327
             L  +  +P   +  G   P DLL RRPD+  AER +    A +G + +++ PK  L G
Sbjct: 258 PVLETTGTLPDYMEPIGVGMPVDLLLRRPDVRSAERSVNAQAALLGASKSDWLPKIFLKG 317

Query: 328 LIGSATA----ISGANLFTGDAAQSAGVLGLRWRLFDFGRINAQIAQAKGQEAEQLAAYR 383
             G A      +  +   T + A S     L W +F  G++      AK Q  E +  + 
Sbjct: 318 SFGYAARDLNDLVKSKSMTYEIAPS-----LSWTIFSGGQLVNATRLAKAQLDESINQFN 372

Query: 384 LAVLRATEDVENALTALVKREQQATVLA----QGVDALGKARGASAAAYEKGVVSLIEVL 439
             VL A ++ +NA+ +     +Q   L     QGV+ L      S   Y++G+     VL
Sbjct: 373 QTVLTAVQETDNAMNSYRNSIKQIVALREVRNQGVETL----KLSLELYKQGLSPFQNVL 428

Query: 440 NADDALLRTSDAQLQAQTEAARSAVAAFKALGGGW 474
           +A  +LL   +  +QAQ  +    ++ +KALGGGW
Sbjct: 429 DAQRSLLSYENQLVQAQGSSLLQLISLYKALGGGW 463