Pairwise Alignments

Query, 1134 a.a., Exodeoxyribonuclease V gamma chain (EC 3.1.11.5) from Xanthomonas campestris pv. campestris strain 8004

Subject, 1208 a.a., exodeoxyribonuclease V, gamma subunit from Marinobacter adhaerens HP15

 Score =  372 bits (956), Expect = e-107
 Identities = 292/973 (30%), Positives = 450/973 (46%), Gaps = 112/973 (11%)

Query: 26  EELRRPVP------EQPVLQPEVVLIPQVAMRRWLQSTLAAEH---------GVAANLEF 70
           E+LRR V         P L+ E  L+    + +WL+  LA +          G+AA ++F
Sbjct: 28  EDLRRAVVYICRHNPMPPLESETFLVQSNGIAQWLKLALAEKRTEDGLEGGLGIAAGMDF 87

Query: 71  LTPGEFVARALERNLG----PADDDLDMATTQWRLYQTLQGELGSDAALAPLAGYLADGD 126
           L P  F+ +A    L     P     D     WRLY+ L   +G D A  PLA +L   D
Sbjct: 88  LFPARFIWQAYRAVLPDGEVPEQSPFDKRRLVWRLYRLLPRLVGQDEAFTPLARFLEGND 147

Query: 127 A-LKPWALAGELGSVFEKYQAWRRDWLLRWESGADA-------DDP-------QARLWRS 171
             L+ + LA ++  +F++YQ +R DWL  WE G D        + P       Q  LWR 
Sbjct: 148 PDLRNFQLAEKVADLFDQYQVFRADWLAAWEQGKDVIITARAEEKPLDAETRWQPLLWRR 207

Query: 172 I-----AGGRQYRARRIGQYLDRYARPDGPL-PQGLPKRLFAFAILNVSPDVLRVLATQA 225
           +     A     R++   +++++  R   P  P  LP R+  F + ++    L  L   +
Sbjct: 208 LVEDVGADAHTSRSQIHTRFMEQGQRLQAPANPSRLPTRIVVFGVSSLPRQALEALYVLS 267

Query: 226 RVGTLHFYLPTPTQGYWGDL----QTLWQRRREGGAVALFA-----EQVQE--NPLLQAW 274
           R   +   +  P Q YW D+    + L   R+ G      +     +Q+ +  NPLL AW
Sbjct: 268 RFSQVVLCVHNPCQFYWADIISDRELLTAERKRGRTHPTLSAIEDPDQLHQHANPLLAAW 327

Query: 275 GAAGRDFMALVGDYEVVHPLAEIAAYADPLDAGRRTLAEGGLGDS--LLRRMQSDLFHRH 332
           G  GRD++ L+ +++  +P     ++  P D      ++ G  ++  LL ++Q+D+ H  
Sbjct: 328 GKQGRDYIRLLDEFD--NPDQYRGSFQTP-DQKIDIFSDHGNPEAPRLLHQLQNDI-HNL 383

Query: 333 APAVPPVLPAVNL---HDPSLQVHACHTRLRELQVLHDQLRALLDDARFDPPLQPREIAV 389
            P          L    D SL  H  H+  RE+++LHDQL A  +    DP L+PR++ V
Sbjct: 384 TPLREIRQQQRQLDVQQDHSLAFHQAHSPQREVEILHDQLLAAFN---VDPTLRPRDVIV 440

Query: 390 LSPDIDPYVPYLDAVFGGH--GSDDGLPYALADASPLASEPLADVFLTLLGLPISRFGLH 447
           + PDI+ Y P++ AVFG +  G    +P+ ++D      EP+     TL+ LP SRF + 
Sbjct: 441 MVPDINVYAPHIQAVFGRYQPGRKRHIPFTISDQGQRHHEPVLIALETLMSLPRSRFAVS 500

Query: 448 EILDLLASAPIAEAAGLDEAGLERLRGWLHGAGARWGLDAVHRRQHQAPGD-DAYTWRFA 506
           EI+ LL    I +  G++E  +   R W+ GA  RWGL   HR     P + +  TW+  
Sbjct: 501 EIISLLEVPGIRDRFGINEDEIPLARRWVEGANIRWGLHGQHRESLDLPAELERNTWQSG 560

Query: 507 LDRLLLGHASGAEDDIDGVAPWPQLEGSALAALDTLLRLLRVLDRHQAALAEAMTPVQWR 566
           L  +LLG+  G ++   GV P+ ++ G   +    L   +  L+    AL    TP +W 
Sbjct: 561 LRSMLLGYGMGDDEPWAGVEPFGEIGGLQASLAGRLNDFVHQLETLWQALQTHRTPDEWE 620

Query: 567 ECLLGLLEALIPAAPSAPRAQRALERLRTLIDQFARDAVRAEY-AGNVPAEVVRAHFAAV 625
                +L         +      L R R  ++Q+  DA+ A      +P  +V+      
Sbjct: 621 HLFSEMLGQFFHKVEGSDLL--LLNRFRRQLEQWLEDALAAGLEEQTLPLNIVKDVLLEG 678

Query: 626 LGESDTRAPLLTGGISFGRMVPMRLLPFRAICLLGMNDGDFPRRDPAAGLNRLTAELGTE 685
           L E       L G ++F  ++PMR +PFR +CLLGMNDGD+PR  P         +L  +
Sbjct: 679 LDEGGLNQRFLAGKVNFATLMPMRAIPFRKVCLLGMNDGDYPRSRPPVDF-----DLMAQ 733

Query: 686 RRRHGDRSTREDDRFLFLQLFASAQEVFYLSYLGADARDGTVREPSVLVSEL---LGSAA 742
             R GDRS REDDR+LFL+   SA+   Y+S++G   +D + R PSVLV +L   L S  
Sbjct: 734 DYRPGDRSRREDDRYLFLEALLSARAQLYISWVGRSIKDDSERPPSVLVGQLQDHLDSLW 793

Query: 743 QYHADP--KAIDALVVRHPLQPFAAAAF--------GAVGEDGAD---------PRRFSY 783
                P  K I+AL  +HPLQPF+ + F        G  GE+ +           R F+Y
Sbjct: 794 SVSGQPETKVIEALTTQHPLQPFSRSYFPKANGLEEGGKGENSSPRPLAEVLEARRLFTY 853

Query: 784 RRQWRPA-VDSLAGQRQPLAPWVAGALPADASVLPASVSIDDLRRLFADPAGQFLRHRLG 842
            R+WR A     A Q Q   P+ A   P         +S++DL      P   F + RL 
Sbjct: 854 EREWRSAHGGEAAAQTQSALPYQAPEEP---------ISLNDLAAFLKKPIDTFYQRRLQ 904

Query: 843 MRLPDPAGEDSDLEPLLAPTRGLEQYGLQQQVFEAAL--AGDADGLYERLRAR--ALLPS 898
           +R  D   +D+D E       GL+++ L  ++ +  L  A   + L++RL+A    +   
Sbjct: 905 VRFEDVEDDDTDNENF--ELDGLDRWRLDNELIQDGLLKASSDEELHDRLQATLDRMARR 962

Query: 899 GPLGRRQLDERLR 911
           G LG    + RLR
Sbjct: 963 GDLGMGVTEHRLR 975