Pairwise Alignments

Query, 745 a.a., Exodeoxyribonuclease V alpha chain (EC 3.1.11.5) from Xanthomonas campestris pv. campestris strain 8004

Subject, 706 a.a., exodeoxyribonuclease V subunit alpha from Vibrio cholerae E7946 ATCC 55056

 Score =  282 bits (722), Expect = 4e-80
 Identities = 237/687 (34%), Positives = 317/687 (46%), Gaps = 128/687 (18%)

Query: 80  DWQRTLAASRWVDQPNPQEPAAADCPLVLEHGLLYLRRYREYERRLALGLQRIAAHSPPP 139
           DWQ  L AS  V Q           PL+ +   LYL RY  YE++LA  L  +AA  P  
Sbjct: 98  DWQALLQASPLVGQQGEA------VPLMFDGSRLYLHRYWHYEKQLAARLTELAA--PQR 149

Query: 140 FAAATLAPLFEQLFP-------------QASPLPQGEGARRAG------EGTGLPEPSIY 180
            + A LA L E+L               Q  PL   E  +         E   L  P+I 
Sbjct: 150 LSPAELANLRERLNTLFARDYLGLWQALQQKPLSSVERIQLLNDRLDVVESDALDWPAIE 209

Query: 181 QDGTNPPEPS------------HHQDHQAQAAALALRRTLLLVTGGPGTGKTTTIARLLL 228
                    +            H  + Q  AAA+AL R   +++GGPGTGKTTT+ +LL 
Sbjct: 210 AVVEKAQRAADLQALEQLIPLTHCLNWQKVAAAVALTRRFAVISGGPGTGKTTTVTKLLA 269

Query: 229 LRIAQAHASNTPAPRIALAAPTGRAAERMAESLRAAVARAIANGIDPALADALPTGASTL 288
             I+Q+ A     P I L APTG+AA R+ ES+  AV++     I+P +A A+P+ +ST+
Sbjct: 270 ALISQSMAQGK-VPEIKLIAPTGKAAARLTESMGKAVSQL---AIEPEIAAAIPSSSSTI 325

Query: 289 HRLLGVIPDSPQFRHTADNPLPFDLIVVDEASMVDLPLMCKLVEAVADGTQLILLGDADQ 348
           HRLLG IP S +FRH   NPL  DL+VVDEASMVDLPLM KLVEA+    +LILLGD DQ
Sbjct: 326 HRLLGAIPGSAEFRHHTRNPLHLDLLVVDEASMVDLPLMVKLVEALPKHARLILLGDKDQ 385

Query: 349 LPSVEAGDVLAAILQAAGPGDTLQPQDADALQPLLGSAPPGSTPASIQTGGHTISHTHTG 408
           L SVEAG VL  I      G     +    L  L G A         QT   T++     
Sbjct: 386 LASVEAGAVLGDICTFLNQG--YGHEQGAQLAELTGFA------TLRQTASKTVN----- 432

Query: 409 GLAGHRVHLLRGYRQADNFALTPLADAIRTSDADTALALLRSGELAGVHFHEDGEDPLAL 468
            +A     L + YR      +  LA AI +       A+ +       HF   GE    L
Sbjct: 433 PVADCLCMLQKSYRFDARSGIGQLAKAINSGSPARVEAVWQQSFSDIEHFALSGEHYQQL 492

Query: 469 GRDALLAHWRALADAHDPA---------------AALRDAARLRLLTAVRAGPQGARGLN 513
            +  + A+   L+  + P                +AL   +R RLL A+R G  G  GLN
Sbjct: 493 LQTLVQAYRPYLSLLNQPTEQFESTQQSMLTLAKSALDAFSRCRLLCALREGDFGVMGLN 552

Query: 514 ARIEQLLAESGSGARRLGSASP--WFQGRLLLITENSYRHGLFNGDVGICLRSEASPFSE 571
            RIE+ L      A +L       W+ GR +++T N +  GL+NGD+G+C+R       +
Sbjct: 553 TRIERAL-----NAHKLIKTQEEIWYHGRPIMVTRNDHGLGLYNGDIGLCMR-------D 600

Query: 572 RSDTNAPSERSDASTVTARSDAAASSGPSHSIGTANRADPVAERRAQGPLVAWFEGDGDS 631
           R D                                           QG L  +FE   D 
Sbjct: 601 RDDD------------------------------------------QGRLKVYFELP-DG 617

Query: 632 QVRGFHPAALPAHESAFAMTVHKAQGSEFDTVWLQLPTRDARVLSRELLYTGITRARRAL 691
            ++   P+ +P HE+A+AMT+HK+QGSEFD   L LP   + +L+REL+YTGITRA++ L
Sbjct: 618 SIKAVLPSRVPQHETAYAMTIHKSQGSEFDLTLLILPPDYSPILTRELVYTGITRAKKQL 677

Query: 692 HLAGSEAALRAALARHAARISGLAWRL 718
            L      L+ A+     R SGL  RL
Sbjct: 678 KLYCDNKVLQRAIKVKTQRASGLVARL 704