Pairwise Alignments

Query, 302 a.a., DNA recombination-dependent growth factor C from Xanthomonas campestris pv. campestris strain 8004

Subject, 308 a.a., recombinase RdgC from Burkholderia phytofirmans PsJN

 Score =  142 bits (359), Expect = 7e-39
 Identities = 87/297 (29%), Positives = 152/297 (51%), Gaps = 6/297 (2%)

Query: 1   MFFRNLTLFRFPT--TLDFSEIETLLPQVQLKPVGPLEMSSRGFISPFGRDEQDVLSHRL 58
           M+F+NL L R P   ++   +++  L      P   +EM S G+ SP    + D L + L
Sbjct: 1   MWFKNLQLHRLPAPWSVTAEQMQKWLAPHAFAPGNSVEMQSHGWASP---RDNDSLVYAL 57

Query: 59  EDFLWLTVGGEDKILPGAVVNDLLERKVAEIEEKEGRRPGGKARKRLKDDLIHELLPRAF 118
              + L    E K+LP +VV  + + +  E+E+++G +P  K  + LK+ +  ELLPRAF
Sbjct: 58  NGQMLLVFRAEKKLLPASVVTQVTKERALELEDQQGFKPSRKQMRELKEQVTDELLPRAF 117

Query: 119 VKSSRTDAILDLQHGYIAVNTSSRKSGENVMSEIRGALGSFPALPLNAEVAPRAILTGWI 178
                T   +D ++G++ ++ +S+   + V   +  ++   P   +    +P A +T W+
Sbjct: 118 SIRRDTRVWIDCKNGWLVIDAASQAVADEVRGLLVKSIDQLPLGTVRVTHSPVAAMTEWL 177

Query: 179 AGEPLPEGLSLGEECEMKDPIEGGAVVKCQHQELRGDEIDKHLEAGKQVTKLALVMDDNL 238
                P G +L ++ E++ P EG A V+     L  +++ +H+EAGKQ  +LA+  +D +
Sbjct: 178 LSGEGPAGFTLDQDTELRSPTEGNATVRYVGHTLDAEDMRRHIEAGKQCMRLAMTWNDRV 237

Query: 239 SFVLGDDLVIRKLKFLDGALDQLEHSEGDGARAELDARFALMSAEVRRLFLLLEDAL 295
           SFVL   L I+++  LD  L +             D+   LM+AE+ R+   L DAL
Sbjct: 238 SFVLTPSLTIKRIAPLD-VLKEASDPTAQNDDERFDSDVTLMTAELDRMLSDLLDAL 293