Pairwise Alignments

Query, 723 a.a., ATP-dependent DNA helicase UvrD/PcrA from Xanthomonas campestris pv. campestris strain 8004

Subject, 723 a.a., DNA helicase II from Vibrio cholerae E7946 ATCC 55056

 Score =  807 bits (2084), Expect = 0.0
 Identities = 402/723 (55%), Positives = 526/723 (72%), Gaps = 6/723 (0%)

Query: 1   LLDHLNPAQREAVSAPPGHYLVLAGAGSGKTRVLIHRIAWLNEVQGVPNHGIFAVTFTNK 60
           LLD LN  QREAV+AP  + L+LAGAGSGKTRVL+HRIAWL  V+      + AVTFTNK
Sbjct: 7   LLDGLNDKQREAVAAPLENLLILAGAGSGKTRVLVHRIAWLMSVEEASPFSVMAVTFTNK 66

Query: 61  AAGEMRHRTDLQLRNGSRGMWIGTFHGLAHRLLRLHWQDARLPEGFQVMDSDDQLRLVKR 120
           AA EMR R +  +   + GMW GTFHG+ HR+LR H+ DA+L E FQ++DSDDQ RL+KR
Sbjct: 67  AAAEMRGRIEELMHGTASGMWCGTFHGICHRILRAHYLDAKLLEDFQIIDSDDQQRLLKR 126

Query: 121 VVQSLELDETKYPPKQMGWWINEQKDEGRRPQHIQPEPNDDWTEVRRQVYAAYQERCDRS 180
           ++++  LD+ ++P +Q+ WWIN QKDEG RP HI     D  T+   ++Y AYQE CDR+
Sbjct: 127 LIKAHNLDDKQWPARQVAWWINNQKDEGLRPTHINAF--DPVTQTYLKLYTAYQEACDRA 184

Query: 181 GLLDFAELLLRAHELLRDTPALLAHYRARFREILVDEFQDTNAIQYAFVRVLAGESGHVF 240
           GL+DFAE+LLRA ELLR    +  HY+ARF+ ILVDEFQDTNAIQYA++R++AG   +V 
Sbjct: 185 GLVDFAEILLRALELLRGNQHIREHYQARFKHILVDEFQDTNAIQYAWLRMMAGAQSNVM 244

Query: 241 VVGDDDQAIYGWRGAKVENVQRFLKDFPGAQTVRLEQNYRSSANILGAANAVIAHNPDRI 300
           +VGDDDQ+IYGWRGA+VEN+++F ++FP   T+RLEQNYRS+  IL A+N +IA+N +R+
Sbjct: 245 IVGDDDQSIYGWRGARVENIEKFTREFPSVNTIRLEQNYRSTKTILEASNTLIANNSERM 304

Query: 301 GKQLWTDSGDGDPIDLYAAYNEVDEARYVVERARQWVRDGGSYGEVAVLYRSNAQSRALE 360
           GKQLWTD   G+PI +Y+AYNE+DEAR+VV + + W   GG+  + A+LYR+NAQSR LE
Sbjct: 305 GKQLWTDGLVGEPISVYSAYNELDEARFVVSKIKGWQEQGGTLTDCAILYRNNAQSRVLE 364

Query: 361 EALIAEQLPYRVYGGMRFFERAEIKDALAYLRMLTNRSDDAAFERAVNTPTRGIGDRTLD 420
           EAL+   L YR+YGGMRFFER EIKDAL+YLR++ NR+DD AFER +NTP RG+GD+TL+
Sbjct: 365 EALLQASLAYRIYGGMRFFERQEIKDALSYLRLINNRNDDTAFERVINTPPRGLGDKTLE 424

Query: 421 EVRRLARANALSLWEAAMLCTQENTLAARARNALATFLSLVGQLQAETGEMDLAERIDHV 480
            +R  AR    +LW+A++    +  L  RA +AL+ F+ L+  L+ E  +M L    DH 
Sbjct: 425 TIRFAARDRGCTLWDASVGLLNDQVLTGRAASALSRFVELINALEEEGIDMPLHVLTDHA 484

Query: 481 LMRSGLREHWAKESRGGLDSESRTENLDELVSVASRFTRPDDEDSQGMTELVAFLAYASL 540
           +  SGL E + +E   G  S++R ENL+ELV+   +F +P  E++Q MT L AFL +A+L
Sbjct: 485 VKTSGLLEMYQQEK--GEKSKARIENLEELVTATRQFEKP--EEAQEMTMLTAFLTHAAL 540

Query: 541 EAGEGQAQAGEEGVQLMTLHSAKGLEFPIVFLVGLEDGLFPSARSLEESGRLEEERRLAY 600
           EAGEGQA   ++ VQLMTLHSAKGLEFP+VF+VG+E+G+FPS  S EE+GRLEEERRL Y
Sbjct: 541 EAGEGQADEHDDAVQLMTLHSAKGLEFPLVFMVGVEEGMFPSQMSAEEAGRLEEERRLCY 600

Query: 601 VGITRARQKLVLCYAESRRIHGQDNYNVPSRFLREIPRDLLHEVRPKVQVSRTASLGAAR 660
           VG+TRA QKL + YAE RR++GQD Y+ PSRF+RE+P   L EVR K QVSR  S G   
Sbjct: 601 VGMTRAMQKLYITYAEMRRLYGQDKYHKPSRFIRELPEGCLDEVRMKAQVSRPTSTGRFS 660

Query: 661 GGPVHAVVDAAPIKLGANVEHPKFGGGVVVDYEGAGAHARVQVQFDEVGAKWLVMAYANL 720
              V    +     LG+ V HPKFG G ++++EG+G  +RVQV F+  G KWLV AYA L
Sbjct: 661 QTVVKESFNETGFNLGSRVRHPKFGEGTIINFEGSGPQSRVQVAFNGEGIKWLVTAYARL 720

Query: 721 TVV 723
             V
Sbjct: 721 EKV 723