Pairwise Alignments

Query, 723 a.a., ATP-dependent DNA helicase UvrD/PcrA from Xanthomonas campestris pv. campestris strain 8004

Subject, 768 a.a., UvrD/REP helicase (NCBI) from Rhodospirillum rubrum S1H

 Score =  475 bits (1223), Expect = e-138
 Identities = 297/746 (39%), Positives = 411/746 (55%), Gaps = 57/746 (7%)

Query: 5   LNPAQREAVSAPPGHYLVLAGAGSGKTRVLIHRIAWLNEVQGVPNHGIFAVTFTNKAAGE 64
           LNP QR AV+   G  LVL+GAG+GKTRVL  R+A +   + V    + AVTFTN+AA E
Sbjct: 28  LNPEQRAAVTTTDGPVLVLSGAGTGKTRVLTARLAQILATRPVRPWQVLAVTFTNRAARE 87

Query: 65  MRHRTDLQLRNGSRGMWIGTFHGLAHRLLRLHWQDARLPEGFQVMDSDDQLRLVKRVVQS 124
           MR R    +   +  +W+GTFH L  R+LR H     L  GF ++D+DDQLRL+K+++++
Sbjct: 88  MRERAGAMIGPMAEQVWLGTFHALGVRMLRRHGDLVGLRSGFTILDADDQLRLLKQILEA 147

Query: 125 LELDETKYPPKQMGWWINEQKDEGRRPQHIQPEPNDDWTEVRRQV--YAAYQERCDRSGL 182
             +D  K+ P+     I   KD+G  P+ +            R V  Y  YQ+R      
Sbjct: 148 EGIDTKKWTPQAGMGLIQRWKDKGLLPEAVPAGDGGREYAGGRAVDLYKQYQQRLAVVNA 207

Query: 183 LDFAELLLRAHELLRDTPALLAHYRARFREILVDEFQDTNAIQYAFVRVLAGESGHVFVV 242
            DF +LLL    +    P +LA Y   F  ILVDE+QDTN  QY ++R+LA   G++  V
Sbjct: 208 ADFGDLLLHCLTIFTKHPDVLADYSKMFHYILVDEYQDTNVAQYLWLRLLARGHGNICCV 267

Query: 243 GDDDQAIYGWRGAKVENVQRFLKDFPGAQTVRLEQNYRSSANILGAANAVIAHNPDRIGK 302
           GDDDQ+IY WRGA+V N+ RF  DFPGA  VRLE+NYRS+  IL AA+ +I HN  R+GK
Sbjct: 268 GDDDQSIYSWRGAEVGNILRFEADFPGATVVRLERNYRSTPTILAAASGLIRHNKGRLGK 327

Query: 303 QLWTDSGD--GDPIDLYAAYNEVDEARYVVERARQWVRDGGSYGEVAVLYRSNAQSRALE 360
            L    GD  GD + +   ++  +EAR VV+      R G     +AVL R+  Q+RA E
Sbjct: 328 DLRAGEGDEAGDAVIVRGLWDGEEEARRVVDDIETRQRAGDRLNGMAVLVRAGFQTRAFE 387

Query: 361 EALIAEQLPYRVYGGMRFFERAEIKDALAYLRMLTNRSDDAAFERAVNTPTRGIGDRTLD 420
           E LI   +PYRV GG RF+ER EI+DA+AYLR++    D  AFER +N P RG+GD +L 
Sbjct: 388 ERLILAGVPYRVVGGARFYERQEIRDAIAYLRLVAQPDDSLAFERIINLPRRGLGDASLQ 447

Query: 421 EVRRLARANALSLWEAAMLCTQENTLAARARNALATFLSLVGQLQAETGEMDLAERIDHV 480
            + R +R  ++SL  AA    + + L  +AR AL  FL  +G+ ++    M   E    V
Sbjct: 448 TLMRASRMASISLMRAAREAIETDELRPQARKALRAFLDDMGRWRSLADAMAPDELCGTV 507

Query: 481 LMRSGLREHWAKESRGGLDSESRTENLDELVSVASRFTRPDDEDSQGMTELVAFLAYASL 540
           L  SG  E W K+     D++ R ENL ELVS    F             L AFL + SL
Sbjct: 508 LDESGYLEMWRKDK--SPDAQGRVENLKELVSALKEF-----------ESLGAFLEHVSL 554

Query: 541 EAGEGQAQAGEEGVQLMTLHSAKGLEFPIVFLVGLEDGLFPSARSLEESG--RLEEERRL 598
              + +A+A E+ V LMTLH+AKGLEF  VFL G E+ +FP  R+L+E+G   LEEERRL
Sbjct: 555 -VMDNEARATEDAVTLMTLHAAKGLEFDTVFLPGWEEEIFPHRRALDENGAEALEEERRL 613

Query: 599 AYVGITRARQKLVLCYAESRRIHGQDNYNVPSRFLREIPRDLLHEVRPK----------- 647
           AYVG+TRAR++ ++ +  +RR++ +    +PSRF+ E+P +++                 
Sbjct: 614 AYVGLTRARKRAIISFVANRRVYNEWRACLPSRFIDELPPEVVERDSASGVYGSGAQGYA 673

Query: 648 ------VQVSRTASLGAARGGPVHAVVDAA----------------PIKLGANVEHPKFG 685
                  ++    S G   G    A V AA                 ++ G  V H KFG
Sbjct: 674 DAPGGWGRLGGPGSWGGGWGNAAPARVPAAGDTPWQTRDRSGDDQPSLRPGDRVFHDKFG 733

Query: 686 GGVVVDYEGAGAHARVQVQFDEVGAK 711
           GG V+    A    R+++ FD+ G K
Sbjct: 734 GGTVL----AADQGRLEIDFDKAGIK 755