Pairwise Alignments

Query, 723 a.a., ATP-dependent DNA helicase UvrD/PcrA from Xanthomonas campestris pv. campestris strain 8004

Subject, 721 a.a., UvrD/REP helicase from Marinobacter adhaerens HP15

 Score =  789 bits (2037), Expect = 0.0
 Identities = 408/723 (56%), Positives = 519/723 (71%), Gaps = 13/723 (1%)

Query: 1   LLDHLNPAQREAVSAPPGHYLVLAGAGSGKTRVLIHRIAWLNEVQGVPNHGIFAVTFTNK 60
           ++D LN AQREAV+A   H LVLAGAGSGKTRVL+HRIAWL  V  VP  GI AVTFTNK
Sbjct: 6   IIDPLNDAQREAVTAQNDHLLVLAGAGSGKTRVLVHRIAWLMTVDRVPPTGILAVTFTNK 65

Query: 61  AAGEMRHRTDLQLRNGSRGMWIGTFHGLAHRLLRLHWQDARLPEGFQVMDSDDQLRLVKR 120
           AA EMR+R +  +   +RG+W GTFHG+AHRLLR HW+DA LPE FQV+DSDDQLRL+KR
Sbjct: 66  AAKEMRYRIEQMMDIPARGLWFGTFHGIAHRLLRSHWKDAGLPENFQVLDSDDQLRLIKR 125

Query: 121 VVQSLELDETKYPPKQMGWWINEQKDEGRRPQHIQPEPNDDWTEVRRQVYAAYQERCDRS 180
           V++  ++DE+K+PPKQ  W+I+ QKDEG R  HIQ  P D +  +  ++Y  Y++ C + 
Sbjct: 126 VMRENQIDESKWPPKQAQWFISSQKDEGLRVDHIQENPGDHFLSIMLKIYRQYEKLCQQG 185

Query: 181 GLLDFAELLLRAHELLRDTPALLAHYRARFREILVDEFQDTNAIQYAFVRVLAGESGHVF 240
           GL+DF ELLLR+HEL    P LLAHY++RF+ ILVDEFQDTN IQYA+++VLA     + 
Sbjct: 186 GLVDFGELLLRSHELWLHRPELLAHYQSRFQHILVDEFQDTNTIQYAWLQVLASNRVPMT 245

Query: 241 VVGDDDQAIYGWRGAKVENVQRFLKDFPGAQTVRLEQNYRSSANILGAANAVIAHNPDRI 300
           VVGDDDQ+IYGWRGAKVEN+Q++ +DFP A+ VRLEQNYRS+  IL AANAVIA+N  R+
Sbjct: 246 VVGDDDQSIYGWRGAKVENIQQYQRDFPNARLVRLEQNYRSTQMILKAANAVIANNQGRL 305

Query: 301 GKQLWTDSGDGDPIDLYAAYNEVDEARYVVERARQWVRDGGSYGEVAVLYRSNAQSRALE 360
           GK+LWTD  +G+PI LYAA+NE DEA Y+ +    WV+DG    E A+LYRSNAQSR LE
Sbjct: 306 GKELWTDGPEGEPISLYAAFNEQDEANYIADSISAWVQDGNLRSESAILYRSNAQSRVLE 365

Query: 361 EALIAEQLPYRVYGGMRFFERAEIKDALAYLRMLTNRSDDAAFERAVNTPTRGIGDRTLD 420
           E+L+ + +PYRVYGG+RF++R EI++ALAYLR++  R DDAAFER VN P RGIG ++L 
Sbjct: 366 ESLMRQGIPYRVYGGLRFYDRQEIRNALAYLRLVQYRRDDAAFERVVNVPPRGIGAKSLA 425

Query: 421 EVRRLARANALSLWEAAMLCTQENTLAARARNALATFLSLVGQLQAETGEMDLAERIDHV 480
           E+R  A   ++SLWE+A        +  RA+  L +F++++  L    G+  L   +   
Sbjct: 426 ELREYATEQSISLWESAERLLDAGQVKGRAKTGLQSFIAIIEGLSEMVGDASLHGLMKQT 485

Query: 481 LMRSGLREHWAKESRGGLDSESRTENLDELVSVASRFTRPDDEDSQGMTELVAFLAYASL 540
           +  SGL+++ A E   G   ++R ENL+ELV+  S     D E   G+  L  F+A A+L
Sbjct: 486 IENSGLKDYHASEK--GEKGQARVENLEELVNALS-----DYEVEDGVDALSEFIAQAAL 538

Query: 541 EAGEGQAQAGEEGVQLMTLHSAKGLEFPIVFLVGLEDGLFPSARSLEESGRLEEERRLAY 600
           +AGE QA   E+ VQLMTLHSAKGLEFP+VFL G+E+GLFP   SLEE GR+EEERRLAY
Sbjct: 539 DAGESQAGDHEDSVQLMTLHSAKGLEFPLVFLAGVEEGLFPHGMSLEEPGRMEEERRLAY 598

Query: 601 VGITRARQKLVLCYAESRRIHGQDNYNVPSRFLREIPRDLLHEVRPKVQVSRTASLGAAR 660
           VGITRA +KLVL YAESRR++GQ+ +N  SRF+REIP D L EVR +  V+R A +   R
Sbjct: 599 VGITRAMKKLVLTYAESRRLYGQEKFNALSRFVREIPGDCLQEVRLRNTVTRPAMV--ER 656

Query: 661 GGPVHAVVDAAP---IKLGANVEHPKFGGGVVVDYEGAGAHARVQVQFDEVGAKWLVMAY 717
                   D+A      LG  V HPKFG G+V++ EG G H RVQV FDE GAKWLV+AY
Sbjct: 657 PNESMFSQDSAQQSGFSLGQRVRHPKFGEGIVMNSEGTGHHTRVQVNFDE-GAKWLVLAY 715

Query: 718 ANL 720
           A L
Sbjct: 716 APL 718