Pairwise Alignments

Query, 927 a.a., DNA polymerase I (EC 2.7.7.7) from Xanthomonas campestris pv. campestris strain 8004

Subject, 1004 a.a., DNA polymerase I from Sinorhizobium meliloti 1021

 Score =  699 bits (1803), Expect = 0.0
 Identities = 428/1001 (42%), Positives = 580/1001 (57%), Gaps = 80/1001 (7%)

Query: 4    LVLIDGSSYLYRAFHALPPLTN-AQGEPTGALFGVVNMLRATLKER--------PAYVAF 54
            L L+DGS +++RAFHA+PPL   + G P  A+ G  NML   L +         P ++A 
Sbjct: 7    LFLVDGSGFIFRAFHAIPPLNRKSDGLPVNAVAGFCNMLWKLLTDARDTSVGVTPTHLAV 66

Query: 55   VVDAPGKTFRDDLYADYKANRPSMPDDLRAQVQPMCDIVHALGIDILRIDGVEADDVIGT 114
            + D   KTFR+ LY  YKANR + P+DL  Q   +     A  +  +  +G EADD+I T
Sbjct: 67   IFDYSSKTFRNGLYDQYKANRTAPPEDLIPQFGLIRHATRAFNLPCIEKEGYEADDLIAT 126

Query: 115  LALQGASDGLAVTISTGDKDFAQLVRPGVELVNTMSGSRMDSDEAVIAKFGVRPNQIVDL 174
             A      G  VTI + DKD  QLV P V + ++M   ++   + VI K+GV P +++DL
Sbjct: 127  YARLAEEAGADVTIVSSDKDLMQLVTPKVSMYDSMKDKQITVPD-VIEKWGVPPEKMIDL 185

Query: 175  LALMGDTVDNVPGVEKCGPKTAAKWLAEYDSLDGVIANADKIKG-KIGENLRAALPRLPL 233
             A+ GD+ DNVPG+   GPKTAA+ L EY  LD ++A A +IK  K  E++ A      L
Sbjct: 186  QAMTGDSTDNVPGIPGIGPKTAAQLLEEYGDLDTLLARAGEIKQQKRRESIIANADLARL 245

Query: 234  NRELVTIKTDVVLASGPRALDLREPNAEALAVLYARYGFTQALRELGGAA---------- 283
            +RELVT+K D  L   P    L   +   L        FT   R +  A           
Sbjct: 246  SRELVTLKKDTPLDVPPEDFRLDSQDGPKLIAFLKAMEFTTLTRRVAAATDTDAEAIEPA 305

Query: 284  -----------------AEAGGLT-APMAVARTEP-GRAR--GTGFVSA------PAAAP 316
                              EAGG   +P + + T P G A      F+S+        A P
Sbjct: 306  HVPVEWGAQAHGPDLDVGEAGGPPPSPQSSSATPPRGNAARAAVSFLSSGQDADTTGATP 365

Query: 317  VELDPALSA--------PGQYETILTQAQLDSWIARLRAAGQFAFDTETDSLDALQANLI 368
              L  A +A           Y TI     L+ WIA  R AG   FDT+  S DA++A+L+
Sbjct: 366  TGLAEARAAYFGKAPFDHSGYRTIRDIDTLERWIADAREAGLVGFDTQATSPDAMRADLV 425

Query: 369  GLSVAA-----EPG----QAAYLPFGHD------FPGAP--AQLDRTQALAQLAPLLTDP 411
            G S+A      +P     +AAY+P  H         G P  +Q+   + L++L  LL DP
Sbjct: 426  GFSLAVADYANDPSGSRIRAAYVPLAHKSGVSDLLGGGPVDSQVPGRETLSRLKELLEDP 485

Query: 412  AVRKLGQHGKYDLHVMRRHGIALAGYADDTLLESFVLNSGSARHDMDSLAKRYLGYDTVK 471
            +V K+GQ+ KY   VM+RHGIA+  + DDT+L S+VL++G+  H MDSLA+R+LG+  + 
Sbjct: 486  SVLKVGQNLKYGYLVMKRHGIAMRSF-DDTMLMSYVLDAGNGAHGMDSLAERWLGHTPIA 544

Query: 472  YEDICGKGAKQIKFAQVSLEDATRYAAEDADITLRLHQVLGKRLAAEPALESVYRDIEMP 531
            Y+D+ G G   + F  V ++ AT YAAEDADI LRL  VL  RLAA+  L  VY  +E P
Sbjct: 545  YKDVTGTGRSSLTFDFVDIDKATAYAAEDADIALRLWHVLKPRLAAK-GLTRVYERLERP 603

Query: 532  LVGVLERIEANGVCVDAAELRRQSADLSKRMLAAQQKATELAGRTFNLDSPKQLQALLFD 591
            L+ VL  +E  G+ VD   L R S +L++   A + +   LAG TF + SPKQL  +LF 
Sbjct: 604  LISVLAGMEERGITVDRQILSRLSGELAQGAAALEDEIYRLAGETFTIGSPKQLGDILFG 663

Query: 592  ELKLPAVVKTPKGQPSTNEEALEAIADQ-HELPRVILDYRSLAKLRSTYTDKLPEMIHPQ 650
            ++ LP   KT  GQ ST+ + LE +A   H+LPR I+D+R L KL+STYTD LP  +HP+
Sbjct: 664  KMGLPGGSKTKTGQWSTSAQVLEDLAAAGHDLPRKIVDWRQLTKLKSTYTDALPGFVHPE 723

Query: 651  SGRVHTSYHQAGAATGRLSSSDPNLQNIPIRTEDGRRIRRAFVAPAGRKLIACDYSQIEL 710
            + RVHT +  A   TGRLSSSDPNLQNIPIRT +GR+IR AFVA  G KL++ DYSQIEL
Sbjct: 724  TKRVHTCFAMAATTTGRLSSSDPNLQNIPIRTGEGRKIRTAFVATPGHKLVSADYSQIEL 783

Query: 711  RIMAHLSGDPGLVGAFESGADVHRATAAEVFGRTIDTVSGDERRAAKAINFGLMYGMSAF 770
            R++AH++  P L  AF  G D+H  TA+E+FG  +D +  + RR AKAINFG++YG+SAF
Sbjct: 784  RVLAHVADIPQLRQAFADGVDIHAMTASEMFGVPVDGMPSEIRRRAKAINFGIIYGISAF 843

Query: 771  GLARQLGIGRGEAQDYIALYFSRYPGVRDFMETTRQQARDKGYVETVFGRRLYLDFINAG 830
            GLA QL I R EA DYI  YF R+PG+RD+ME T+  AR+ GYVET+FGRR +   I + 
Sbjct: 844  GLANQLSIERSEAGDYIKRYFERFPGIRDYMENTKAFARENGYVETIFGRRAHYPDIRSS 903

Query: 831  SQGQRAGAERAAINAPMQGTAADIIKRAMVSVDGWIADHAQRALMILQVHDELVFEADAD 890
            +   RA  ERA+INAP+QG+AADII+RAMV ++  +      A M+LQVHDEL+FE +  
Sbjct: 904  NPSMRAFNERASINAPIQGSAADIIRRAMVKMEPALEAAKLSARMLLQVHDELIFEVEDG 963

Query: 891  FVDTLLAEVTARMSAAA----SLRVPLVVDSGVGDNWDEAH 927
             ++  +  + + M  AA     +RVPL VD+    NWDEAH
Sbjct: 964  EIERTIPVIISVMENAAMPALDMRVPLKVDARAAHNWDEAH 1004