Pairwise Alignments

Query, 927 a.a., DNA polymerase I (EC 2.7.7.7) from Xanthomonas campestris pv. campestris strain 8004

Subject, 924 a.a., DNA polymerase A (NCBI) from Rhodospirillum rubrum S1H

 Score =  689 bits (1778), Expect = 0.0
 Identities = 408/947 (43%), Positives = 563/947 (59%), Gaps = 52/947 (5%)

Query: 4   LVLIDGSSYLYRAFHALPPLTNAQGEPTGALFGVVNMLRATLKERPA-YVAFVVDAPGKT 62
           L L+DGS Y++RA+H+LPP+T   G P  A++G   ML   L +  A ++A + D    +
Sbjct: 7   LYLVDGSGYIFRAYHSLPPMTRTDGTPVNAVYGFTAMLMKLLADMDADHLAVIFDKARVS 66

Query: 63  FRDDLYADYKANRPSMPDDLRAQVQPMCDIVHALGIDILRIDGVEADDVIGTLALQGASD 122
           FR+++Y  YKA RP  P+DL  Q   + + V A  +  +  DG EADD+I T A +  ++
Sbjct: 67  FRNEIYPLYKAQRPPPPEDLIPQFPLIREAVRAFNVPCIERDGFEADDLIATYAKRARAE 126

Query: 123 GLAVTISTGDKDFAQLVRPGVELVNTMSGSRMDSDEAVIAKFGVRPNQIVDLLALMGDTV 182
           G  VT+ + DKD  QLV  GV L + M    +   E V  KFGV P++++D+ AL GD V
Sbjct: 127 GAIVTVVSSDKDLMQLVGEGVALFDPMKNRAIGPAE-VFEKFGVAPDKVIDVQALAGDAV 185

Query: 183 DNVPGVEKCGPKTAAKWLAEYDSLDGVIANADKIKG-KIGENLRAALPRLPLNRELVTIK 241
           DNVPGV   G KTAA+ + EY  L+ ++A A +IK  K  ++L        ++ +LV ++
Sbjct: 186 DNVPGVPGIGVKTAAQLIGEYGDLETLLARAAEIKQPKRRQSLLDHAEAARISLQLVRLR 245

Query: 242 TDVVLASGPRALDLREPNAEALAVLYARYGFTQALRELGGAAAEAGGLTAPMAVARTEPG 301
            DV ++         EP+AE LA   A  GF   L  +   A    G T           
Sbjct: 246 DDVEVSETLADFATAEPDAEVLAGFLAENGFRSLLARVTAVAHAKAGTTPQ--------- 296

Query: 302 RARGTGFVSAPAAAPVELDPALSAPGQYETILTQAQLDSWIARLRAAGQFAFDTETDSLD 361
                     PAAAP + D        Y  + T A+L  WIA+ RAAG  A DTETDSL 
Sbjct: 297 ----------PAAAPADDD--------YVLVNTLAELGVWIAKARAAGLVAIDTETDSLK 338

Query: 362 ALQANLIGLSVAAEPGQAAYLPFGH--------DFPGAPAQL----DRTQALAQLAPLLT 409
           A +A L+G+S+A  PG+A Y+PF H        DF GA   +    D+  ALA L  LL 
Sbjct: 339 ARRATLVGVSLAITPGRACYIPFAHGLRKAEGLDFDGAAPPVANIEDKAAALALLGDLLR 398

Query: 410 DPAVRKLGQHGKYDLHVMRRHGIALAGYADDTLLESFVLNSGSARHDMDSLAKRYLGYDT 469
           DP V K+G + K+DLHV+   G++     DDT++ S+VL+     H MD LA  +LG  T
Sbjct: 399 DPGVLKVGHNLKFDLHVLANAGLSDVAPVDDTMVLSYVLDGTLHGHGMDELAGLHLGRRT 458

Query: 470 VKYEDICGKGAKQIKFAQVSLEDATRYAAEDADITLRLHQVLGKRLAAEPALESVYRDIE 529
           + +E++CGKG  QI F QV L+ A  YAAEDAD+TLRL+ +L  RL  E  +  V+  ++
Sbjct: 459 ITFEEVCGKGKGQITFDQVPLDKAVAYAAEDADVTLRLYLLLRDRLLKEHMVR-VHETLD 517

Query: 530 MPLVGVLERIEANGVCVDAAELRRQSADLSKRMLAAQQKATELAGRTFNLDSPKQLQALL 589
            P+V +L  +EA GV VDA  L+  S D +KRM   + +   LAG  FN+ SPKQL  +L
Sbjct: 518 RPMVRILTDMEAAGVRVDALRLKALSGDFAKRMGDLEDQIHALAGHAFNVASPKQLGEVL 577

Query: 590 FDELKLPAVVKTPK-GQPSTNEEALEAIADQ-HELPRVILDYRSLAKLRSTYTDKLPEMI 647
           F+E+ L    K+ K G  ST+ + L+ +A + H+LP  +LD+R  AKL+ TYTD L   I
Sbjct: 578 FEEMSLTGGKKSRKTGAWSTDAQVLDQLAAEGHDLPARVLDWRQYAKLKGTYTDALVAEI 637

Query: 648 HPQSGRVHTSYHQAGAATGRLSSSDPNLQNIPIRTEDGRRIRRAFVAPAGRKLIACDYSQ 707
             ++GRVHT+Y     ATGRLSS+DPNLQNIP+R+E GR+IR AF+A  G  LI+ DYSQ
Sbjct: 638 DERTGRVHTTYGLTVTATGRLSSNDPNLQNIPVRSEAGRKIREAFIAAPGHLLISADYSQ 697

Query: 708 IELRIMAHLSGDPGLVGAFESGADVHRATAAEVFGRTIDTVSGDERRAAKAINFGLMYGM 767
           IELR++AH++G   L  AF  G D+H  TA++VFG  ++ +    RR AKAINFG++YG+
Sbjct: 698 IELRLVAHVAGITALRQAFAEGKDIHAITASQVFGVPVEGMDPMVRRQAKAINFGIIYGI 757

Query: 768 SAFGLARQLGIGRGEAQDYIALYFSRYPGVRDFMETTRQQARDKGYVETVFGRRLYLDFI 827
           SA GLA+QLG+GR EA  +I  YF+R+P +R +MET +++AR  G+V T FGRR+ +  I
Sbjct: 758 SAHGLAQQLGVGRPEAAAFITAYFARFPEIRSYMETVKEEARTVGWVATPFGRRIPIPGI 817

Query: 828 NAGSQGQRAGAERAAINAPMQGTAADIIKRAMVSVDGWIADHAQRALMILQVHDELVFEA 887
              +   RA AER AINAP+QG AADIIKRAM+++   +        M+LQVHDEL+FEA
Sbjct: 818 QDKNPAARAFAERQAINAPIQGGAADIIKRAMIALPPALEQAGLATRMLLQVHDELIFEA 877

Query: 888 DADFVDTLLAEVTARMSAAASL-------RVPLVVDSGVGDNWDEAH 927
                +T  A V   M  A +L        VPL VD+G+  +W EAH
Sbjct: 878 PEAEAETAAALVKRVMETAVTLTDDQGERTVPLEVDTGIAASWAEAH 924