Pairwise Alignments

Query, 589 a.a., ATP-dependent RNA helicase RhlB from Xanthomonas campestris pv. campestris strain 8004

Subject, 619 a.a., ATP-dependent RNA helicase RhlE from Pseudomonas fluorescens FW300-N1B4

 Score =  293 bits (750), Expect = 1e-83
 Identities = 200/576 (34%), Positives = 280/576 (48%), Gaps = 57/576 (9%)

Query: 25  LTFSSFDLHPALVAGLESAGFTRCTPIQALTLPVALPGGDVAGQAQTGTGKTLAFLVAVM 84
           ++F+S  L  ALV  +E+AG+T  TP+Q   +P  L G D+   AQTGTGKT  F + ++
Sbjct: 1   MSFASLGLSEALVRAIEAAGYTEPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPIL 60

Query: 85  NRLLIR--PALADRK-PEDPRALILAPTRELAIQIHKDAVKFGADLGLRFALVYGGVDYD 141
            RL     P  + R  P  PR L+L PTRELA Q+H+    +  DL    A ++GGV  +
Sbjct: 61  ERLFPNGHPDKSQRHGPRQPRVLVLTPTRELAAQVHESFKVYARDLKFVSACIFGGVGMN 120

Query: 142 KQRELLQQGVDVIIATPGRLIDYVKQHKVVSLHACEICVLDEADRMFDLGFIKDIRFLLR 201
            Q + + +GVDV++A PGRL+D   Q  V   H  EI VLDEADRM D+GF+ D++ +L 
Sbjct: 121 PQVQAMSRGVDVLVACPGRLLDLAGQGSVDLSHV-EILVLDEADRMLDMGFVHDVKKVLA 179

Query: 202 RMPERGTRQTLLFSATLSHRVLELAYEHMNEPEKLVVETETITAARVRQRIYFPSDEEKQ 261
           R+P +  RQ LLFSAT S  + +LA + ++ PE++ V     T  R+ QR++      K+
Sbjct: 180 RLPSK--RQNLLFSATFSKDITDLAGKLLHNPERIEVTPPNTTVERIEQRVFRLPANHKR 237

Query: 262 TLLLGLLSRSEGARTMVFVNTKAFVERVARTLERHGYRVGVLSGDVPQKKRESLLNRFQK 321
           +LL  L++     + +VF  TK    R+A  L++HG     + G+  Q  R   L  F+ 
Sbjct: 238 SLLAHLITAGAWEQVLVFTRTKHGANRLAEYLDKHGLTAVAIHGNKSQNARTKALADFKA 297

Query: 322 GQLEILVATDVAARGLHIDGVKYVYNYDLPFDAEDYVHRIGRTARLGEEGDAISFACERY 381
           G++ ILVATD+AARGL ID + +V N++LP   EDYVHRIGRT R G  G+AIS      
Sbjct: 298 GEVRILVATDIAARGLDIDQLPHVVNFELPNVDEDYVHRIGRTGRAGRSGEAISLVAPDE 357

Query: 382 AMSLPDIEAYIEQKIPVEPVTTELLTPLPRTPRATVEGEEVDDDAGDSVGTIFREAREQR 441
              L  IE   +QKI                     +G  +  D+      +  E  E R
Sbjct: 358 EKLLKSIERMTKQKI--------------------ADGNLMGFDS----SAVEAEKPEVR 393

Query: 442 AADEARRGGGRSGPGGASRSGSGGGRRDGAGADGKPRPPRRKPRVEGEAD-PAAAPSETP 500
              + R      GP G   +GSGGG   G    GK +  + KP   G  D PA       
Sbjct: 394 ERPDVRNPRNPRGPRGDGPNGSGGG--GGRKDKGKDKGGKEKPAATGRGDRPAREHKPRE 451

Query: 501 VVVAAAAETPAVTAAE---------------GERA-------PRKRRRRRNGRPVEGAEP 538
              A   + PA  AA                G R        P + R RR G P +GA  
Sbjct: 452 GTPAREQQRPAPRAAADRAPDEFLDDDVDNFGNRVDYVPQAKPAQGRGRRPGAPAQGAGA 511

Query: 539 VVASTPVPAPAAPRKPTQVV--AKPVRAAAKPSGSP 572
                P      PR  +       P + +   +G+P
Sbjct: 512 PRTGQPQGRQNGPRSSSGATTGTPPAKRSGPRNGAP 547