Pairwise Alignments

Query, 702 a.a., Helicase PriA essential for oriC/DnaA-independent DNA replication from Xanthomonas campestris pv. campestris strain 8004

Subject, 740 a.a., primosomal protein N' from Pseudomonas stutzeri RCH2

 Score =  578 bits (1489), Expect = e-169
 Identities = 327/672 (48%), Positives = 422/672 (62%), Gaps = 34/672 (5%)

Query: 4   PVTTLRVALPVPLPQLFDYLPLQDTDVDGPDRVGCRVRVPFGPRELIGVVVERGQQPSA- 62
           P   LR+ALP PL +LFDYLP          + G R+RVPFG RE++G++VE   Q    
Sbjct: 2   PSCILRLALPSPLRRLFDYLPPAGVS-RAALQPGVRLRVPFGRREVVGILVELSDQSEVP 60

Query: 63  -EGLRAALDWCDDTPLLIDELARSLQWLARYTHAPLGEAQASALPGPLRRGEPLADTHAW 121
            E L+ AL+  D  P L   L +   W A+Y    LG+  + ALP  LR+GEP       
Sbjct: 61  VEKLKPALELLDAKPPLPAPLFKLCLWTAQYYQHSLGDTLSWALPVLLRQGEPAEARQER 120

Query: 122 AWQLTEAGHTGAGSLRAG--SRPALLA----------ALLLAGPLAEEPLEQQLPQWR-- 167
            W+L E        L      R AL A          ALL    L ++ L+  L +    
Sbjct: 121 YWRLAEGASPEDPRLARAPKQREALKAIAQHAHGLPHALLSKLQLNKDSLDLLLEKGLVH 180

Query: 168 -EAARNLAKRGYAERVAVAADTLPARPGTGPQLNDEQQAATDAIRAG-SGFATYLLDGVT 225
            E+ R+   RG++    + A+           LN +Q+AA +A+ AG  GF  +LL GVT
Sbjct: 181 IESRRSKPSRGHSGSWLLQAELT---------LNAQQRAAFEAVSAGLGGFQAFLLAGVT 231

Query: 226 GSGKTEVYLQAIADCLAAGKQALVLVPEIGLTPQTLGRFRERLGVPVHALHSGLSDGERA 285
           GSGKTEVYLQ I   L AGKQALVL+PEI L PQTL RF +R    +  LHS ++D +R 
Sbjct: 232 GSGKTEVYLQLIHRVLEAGKQALVLIPEINLGPQTLARFEQRFNARIALLHSNVNDRDRL 291

Query: 286 RVWAAAWRGEAKLIVGTRSAVFTPLPNAGLIVIDEEHDGSYKQQDGIRYHARDFALVRGK 345
             W AA  GEA +I+GTRSA+FTP+ N GLI+IDEEHD SYKQQ+G+RYHARD ALVR +
Sbjct: 292 DAWLAARDGEADIIIGTRSALFTPMKNPGLIIIDEEHDASYKQQEGLRYHARDLALVRAR 351

Query: 346 ALDVPVILGSATPSLESLHNAYSGRYRHLRLSRRAGDARPPRVRVLDVRKRPLKDGLSPE 405
             ++P++LGSATPSLESLHNA+SGRY  L+L++RAG+A+ PR   LDV+ RPL  G+S  
Sbjct: 352 QENLPIVLGSATPSLESLHNAHSGRYALLKLTQRAGNAQSPRFLRLDVKSRPLDAGISGP 411

Query: 406 VLAGIGATLARGEQVLVFKNRRGYAPVLLCHDCGWTAACQRCSTPLHQTPMTVHAGGRRL 465
           +   IG TLA G+QVL++ NRRG+AP LLCHDCGW + C RC        MT+H     L
Sbjct: 412 LQQAIGQTLAAGQQVLIYLNRRGFAPTLLCHDCGWLSQCPRC-----DARMTLHQRHNEL 466

Query: 466 QCHHCGARQPAPLACPACASLALQPQGIGTERLEERLVEAFPEAPVVRIDRSTTQRRDAL 525
           +CHHCG  +  P  CP C  + L+P G GTER EERL   FP+ PV+RIDR +T R+ A+
Sbjct: 467 RCHHCGHVERPPRNCPDCGKVDLRPVGAGTERAEERLGILFPDYPVLRIDRDSTARKGAM 526

Query: 526 ETQLARLGT-DAGILVGTQILAKGHDLPRLTMVVVVGIDEGLFSADFRAAEKLAQQLIQV 584
           E  +  +   +  +LVGTQ+LAKGH  PR+T+V ++  D GLFSADFRA+E++AQ ++QV
Sbjct: 527 EQMIGTINRGEPCLLVGTQMLAKGHHFPRVTLVAILDADGGLFSADFRASERMAQLIVQV 586

Query: 585 AGRAGRADRPGEVWLQTHHPEHPLLQTLVNGGYHAFADAELQQREAAGFPPFAHLALFRA 644
           AGRAGRA+ PG+V +QTH  +HPLL  L   GY AFA+  L +R AAG PPF+HLAL RA
Sbjct: 587 AGRAGRAEEPGKVIIQTHLADHPLLVQLTEQGYFAFAEQALSERRAAGLPPFSHLALLRA 646

Query: 645 EAKDVAAANQFL 656
           EA+    A  FL
Sbjct: 647 EAQKPGQAEAFL 658