Pairwise Alignments

Query, 458 a.a., Multidrug and toxin extrusion (MATE) family efflux pump YdhE/NorM from Xanthomonas campestris pv. campestris strain 8004

Subject, 464 a.a., putative efflux protein, MATE family from Pseudomonas stutzeri RCH2

 Score =  343 bits (879), Expect = 9e-99
 Identities = 187/444 (42%), Positives = 267/444 (60%), Gaps = 6/444 (1%)

Query: 13  RFAAEVRTTGLLALPLVLGHVSTGLIGFVDNVIAGHHGTATLAAVTIGTSLLWLPM-LVP 71
           R   E+RT   LALP+++  +++  +GFVD V+AG      LAAV +G S+ W+P+ L+ 
Sbjct: 9   RVRLELRTLFALALPMMIAQLASTAMGFVDTVMAGRVSPHDLAAVALGNSI-WVPVYLLL 67

Query: 72  IGTLISLTASVSQLVGAGREREIGPLFRQALWLSLGLGALMFGFLTAVPPLLPTFGIAPD 131
            G  ++ T +V+Q  GAG   EIGPL RQALW+  G+G      +    P+L    + P 
Sbjct: 68  SGITLATTPNVAQRYGAGAHGEIGPLVRQALWMGAGIGLTSALLMWNAEPVLHLMRVEPA 127

Query: 132 IVPGATDFLHAVRWGGPALTFYFCMRYLSEGMHWTLPTMLLGFGGLLVLAPLGYVLTYGK 191
           ++     +L AV  G PA+  Y  +R  S+G+    P+M++G  GLL+  PL YV  YGK
Sbjct: 128 LIEPTMAYLRAVACGFPAVALYQVLRCFSDGLGHPRPSMVIGILGLLLNIPLNYVFIYGK 187

Query: 192 FGFAEHGAQGLGMASAITMWVQAIAFALYLWRSRRFAHLELFTHLEGPRWRAIGELLRTG 251
           FG    G  G G+++A+ M    IA ++++ R+  +   +LF+H E PRW  +  LL  G
Sbjct: 188 FGIPAMGGVGCGVSTALVMLFMLIAMSVWVKRAPAYQRSQLFSHFEWPRWPMLRHLLSVG 247

Query: 252 LPIGITVLMEGGLFIVTALLIGRLGSTEAAAHQIAINVSQLCFMIPMGVAEATTVRVGHA 311
           +PIGI V  E  +F V ALLIG LG+T  A HQIA+N + L FMIP+ +  A TVR+G  
Sbjct: 248 VPIGIAVFAEASIFSVIALLIGALGATVVAGHQIALNFTSLIFMIPLSLGMAVTVRIGQE 307

Query: 312 VGRGDPLGMRRAAWAGYAIVLGTQAVSASILLLGHDAIVGVYTNDAAVAALASVLLLFAA 371
           +GR  P   R  A  G A  L     SAS++LL  + I  +YT D AV A+A+ L  +AA
Sbjct: 308 LGRSAPRDARFVAGVGIAAALVYACFSASVMLLFSEQIARIYTPDPAVIAVAASLFFYAA 367

Query: 372 TFQFPDGIQVLSAGALRGLKDTRVPMFLAMFSYWGLGMPLGAGLG----LGLGWGPQGMW 427
            FQF D +QV +AGALRG +DTR+ M   +F+YWG+G+P+G  LG    LG   GP G+W
Sbjct: 368 LFQFSDVVQVTAAGALRGYQDTRMTMIYTLFAYWGIGLPVGYLLGLTDHLGTATGPAGLW 427

Query: 428 IGLILGLTAAAILMGLRFRQTSRR 451
            GLI GL+ AA+L+ +R  +++RR
Sbjct: 428 QGLIAGLSCAALLLSVRLARSARR 451