Pairwise Alignments

Query, 458 a.a., Multidrug and toxin extrusion (MATE) family efflux pump YdhE/NorM from Xanthomonas campestris pv. campestris strain 8004

Subject, 468 a.a., Multi antimicrobial extrusion protein MatE (NCBI) from Rhodospirillum rubrum S1H

 Score =  231 bits (588), Expect = 5e-65
 Identities = 149/453 (32%), Positives = 227/453 (50%), Gaps = 12/453 (2%)

Query: 1   MSVPHSSPSATPRFAAEVRTTGLLALPLVLGHVSTGLIGFVDNVIAGHHGTATLAAVTIG 60
           +S+P S   A   +  E+  T  LA PL+L +++   +   D ++ G  G+ +LAA  + 
Sbjct: 6   VSLPRSGHGA---WRTELGATLSLAWPLILTNLAQAALTTTDLLLIGSLGSRSLAAAAMA 62

Query: 61  TSLLWLPMLVPIGTLISLTASVSQLVGAGRE--REIGPLFRQALWLSLGLGAL-MFGFLT 117
             L    ML  +G + +    ++  +G  R   R++    RQ LW S GL +L ++  L 
Sbjct: 63  AGLFQALMLFGLGLVSATLPLLATALGRNRHSVRDVRRTVRQGLW-SAGLISLPLWLILW 121

Query: 118 AVPPLLPTFGIAPDIVPGATDFLHAVRWGGPALTFYFCMRYLSEGMHWTLPTMLLGFGGL 177
               +L  FG  P +   A  F+H ++WG      Y  +R     +   +  +L+    +
Sbjct: 122 HTEAVLIAFGQEPALAAEAAGFMHTLQWGLLPFLGYIVLRAFLSALERPMWPLLVAGLAI 181

Query: 178 LVLAPLGYVLTYGKFGFAEHGAQGLGMASAITMWVQAIAFALYLWRSRRFAHLELFTHLE 237
              A   + L +G  G    G  G G++S+++        AL + R RR     LF    
Sbjct: 182 GFNALAAWALIFGHLGLPALGLPGAGVSSSLSSLFMVAGLALVITRQRRLKRYRLFGRFW 241

Query: 238 GPRWRAIGELLRTGLPIGITVLMEGGLFIVTALLIGRLGSTEAAAHQIAINVSQLCFMIP 297
            P W  +  L R GLP+ I+   E  +F  + +++G LG+   AAH IA+ ++ L FM+P
Sbjct: 242 RPDWPRLVTLWRLGLPMAISFAFEVSIFQASMMMMGILGADALAAHTIALQIATLTFMVP 301

Query: 298 MGVAEATTVRVGHAVGRGDPLGMRRAAWAGYAIVLGTQAVSASILLLGHDAIVGVY---- 353
           +G+ +A TVRVG A+G G    +RRA W  Y   +     +A ++L     ++G +    
Sbjct: 302 LGLGQAATVRVGRALGAGTIPALRRAGWVAYGAGVAFMGGAALMMLSVPRLLIGAFLDAD 361

Query: 354 -TNDAAVAALASVLLLFAATFQFPDGIQVLSAGALRGLKDTRVPMFLAMFSYWGLGMPLG 412
              +A V  LA VL+  AA FQ  DG Q +  G LRGL DT+VPM LA   YWGLG+PLG
Sbjct: 362 LAENAPVIDLAVVLMALAALFQIADGAQAVCNGMLRGLHDTKVPMLLAALGYWGLGLPLG 421

Query: 413 AGLGLGLGWGPQGMWIGLILGLTAAAILMGLRF 445
           A L   LG G  G+WIGL  GL+  A+LM  R+
Sbjct: 422 ALLAFPLGVGAPGVWIGLAGGLSVVAVLMTRRW 454