Pairwise Alignments

Query, 633 a.a., protease IV from Xanthomonas campestris pv. campestris strain 8004

Subject, 616 a.a., signal peptide peptidase SppA from Vibrio cholerae E7946 ATCC 55056

 Score =  380 bits (977), Expect = e-110
 Identities = 220/564 (39%), Positives = 327/564 (57%), Gaps = 14/564 (2%)

Query: 16  GLWDVMNFTRRLIFNLVFFGFLFLLLLLFVVAIARGDGTKPLAARTT-LVIAPEGTLVEQ 74
           G+W  + F R  + NL+F   + ++  ++V A    D   P   +++ LV+   G +VEQ
Sbjct: 14  GIWKAITFIRLALTNLIFLLSIGIIYFIYVHA----DAPLPTMDKSSALVLNLSGPIVEQ 69

Query: 75  FS-ADPVSRSLAKAVGDKSAEEVQLRDLVRVIEAAGKDSKIERVLLNLDKLQPSGFASQR 133
            +  +P+        G++   E  L D+V  +  A  D+ +  ++L L  +  +     R
Sbjct: 70  STHINPMDSFTGSVFGEELPRENVLFDIVETLRHAKNDNNVTGLVLALGDMPETNLTKLR 129

Query: 134 EVAKALQGLRASGKQIVAFSESMSQGQYLLAAQANEVYLDPMGSVLLEGLGRYRQYFREG 193
            +AKA+   +ASGK + A  +  +Q QY LA+ A+++YL P G+VLL+G   Y  Y++  
Sbjct: 130 YIAKAINEFKASGKPVFAVGDFYNQSQYYLASYADKIYLAPDGAVLLKGYSAYSMYYKT- 188

Query: 194 LQDKLGVDVHLFRVGEYKSAAEPYILDAASADAKEADLFWMNDVWQRYLADVATARKLSP 253
           L +KL V  H+FRVG YKSA EP++ D  S  A+E+   W+  +W  Y+ DVA  R++  
Sbjct: 189 LLEKLDVTTHVFRVGTYKSAIEPFVRDDMSDAARESASRWLTQLWSAYVDDVAANRQIEI 248

Query: 254 AQLAAGIDTLPEGVTAAGGDLAKFALQQKLVDGLKTREQVDSLLTERGVADNDADGGFRS 313
             L   ++     +    GDLA  + +  LVD L TR+QV   L E     +D    + +
Sbjct: 249 KTLTPSMEQFVAQLKEVNGDLAALSKKVGLVDELATRQQVRQTLAE--TFGSDGKDSYNA 306

Query: 314 IDFGSYLTQLQAQHSPMDSRPQVAVVVAAGEISGGEQPAGRIGGESTAALLRQARDDEEI 373
           I +  Y T ++   + +     +AVVVA+G I  G QP G +GG++ A LLR+AR+D  +
Sbjct: 307 IGYYEYKTTIKP--TTLTDANDIAVVVASGAIMDGSQPRGTVGGDTVAGLLREARNDSNV 364

Query: 374 KAVVLRVDSPGGEVFASEQIRREVVALKQAGKPVVVSMGDLAASGGYWISMNADRIYADP 433
           KAVVLRVDSPGG  FASE IR E+ ALK AGKPVVVSM  LAASGGYWISM+AD+I A P
Sbjct: 365 KAVVLRVDSPGGSAFASEVIRNEIEALKAAGKPVVVSMSSLAASGGYWISMSADKIVAQP 424

Query: 434 STISGSIGIFGMVPNLTRALDKIGVHTDGVGTTRFAGAFDITRPLDPAAGQVIQAVINKG 493
           +T++GSIGIF ++    + L+ +G++TDGVGTT F+G   +T  L   A   IQ  I  G
Sbjct: 425 TTLTGSIGIFSVITTFEKGLNNLGIYTDGVGTTPFSGQ-GLTTGLTQGAKDAIQLGIEHG 483

Query: 494 YADFTGKVAQARHQSVEAIDKVARGRVWSGAQAKDHGLVDAFGGMQEAVADAASRAKLSK 553
           Y  F   VA+ R  +++A+D++A+GRVW+   A+  GLVD  G   +AV  AA  A+L  
Sbjct: 484 YQRFISLVAEKRGLTLKAVDELAQGRVWTAQDAQTLGLVDQLGDFDDAVHLAADLAQLD- 542

Query: 554 GKFRVRYVEKAATPFSQFMSGFAG 577
            ++ + +VE+  TP  QF+    G
Sbjct: 543 -QYNLYWVEEPLTPAQQFLQDLLG 565



 Score = 26.9 bits (58), Expect = 0.003
 Identities = 15/43 (34%), Positives = 28/43 (65%), Gaps = 2/43 (4%)

Query: 586 SDSGMARALLARS-LPEVD-TQLRFVEDAVHDSKAGGTPVKAL 626
           +D+ +   +LA   +PE + T+LR++  A+++ KA G PV A+
Sbjct: 106 NDNNVTGLVLALGDMPETNLTKLRYIAKAINEFKASGKPVFAV 148