Pairwise Alignments

Query, 633 a.a., protease IV from Xanthomonas campestris pv. campestris strain 8004

Subject, 593 a.a., Peptidase S49 (NCBI) from Rhodospirillum rubrum S1H

 Score =  220 bits (561), Expect = 1e-61
 Identities = 166/508 (32%), Positives = 251/508 (49%), Gaps = 35/508 (6%)

Query: 55  KPLAARTTLVIAPEGTLVEQFSADPVSRSLAKAVGDKSAEEVQLRDLVRVIEAAGKDSKI 114
           +PL  +  L +   G+  E   A P    L    G+   E   LR +   + AA  D  +
Sbjct: 38  EPLPTKLVLDLDASGSFSEDGGALP---GLGFLSGE--GERPSLRAVTEGLIAAASDPTV 92

Query: 115 ERVLLNLDKLQPSGFASQREVAKALQGLRASGKQIVAFSESMSQ-GQ----YLLAAQANE 169
           + +++ + +    G A  +E+ +A+   RASGK  +A++E++ + GQ    Y LA+   +
Sbjct: 93  KGLMVRIGE-GSLGMAQAQELRQAILAFRASGKPSIAYAETIGEFGQGTVPYYLASAVED 151

Query: 170 VYLDPMGSVLLEGLGRYRQYFREGLQDKLGVDVHLFRVGEYKSAAEPYILDAASADAKEA 229
           V+L P G +   G    R  F   L D LG+        E+K AA         + A+E 
Sbjct: 152 VWLQPSGMLGTTGFA-VRMPFVRKLLDDLGILPQFIARKEFKDAAAT-ATQYGMSPAQEI 209

Query: 230 DLFWMNDVWQ-RYLADVATARKLSPAQLAAGIDTLPEGVTAAGGDLAKFALQQKLVDGLK 288
               +   W  + +  VA AR LS  Q+   ID  P         LA  AL+  L+D L 
Sbjct: 210 SFGALVQGWSGQVVRAVAEARGLSEDQVRGLIDRSPL--------LAAEALESGLIDRLG 261

Query: 289 TREQVDSLLTERGVADNDADGGFRSIDFGSYLTQLQAQHSPMDSRPQVAVVVAAGEISGG 348
             ++    + ER   D         +  G Y  + QA+  P      +A++ A+G I  G
Sbjct: 262 YPDEARKAMGERAGTDEH-------LSVGQY-AERQAKAKPAPGAKGLALIAASGPIVTG 313

Query: 349 EQPAGRIGGE-----STAALLRQARDDEEIKAVVLRVDSPGGEVFASEQIRREVVALKQA 403
           +       G+     + AA +  A DD  + A+VLR+DSPGG    S+ + R V   +Q 
Sbjct: 314 DGKVSPFDGKEIDARALAATIDSAVDDAGVAAIVLRIDSPGGSYVGSDLVWRAVSRARQH 373

Query: 404 GKPVVVSMGDLAASGGYWISMNADRIYADPSTISGSIGIFGMVPNLTRALDKIGVHTDGV 463
           G PV+ SMGD+AASGGY+++M A++I A P T++GSIG+      + +A + +G+   GV
Sbjct: 374 GLPVIASMGDVAASGGYYMAMGANKIVAQPGTLTGSIGVVAGKFTIAKASEDLGIAWGGV 433

Query: 464 GTTRFAGAFDITRPLDPAAGQVIQAVINKGYADFTGKVAQARHQSVEAIDKVARGRVWSG 523
              R A  F +T P D A  + +  +++  YADFTGK A  R  S EAI++ ARGRVW+G
Sbjct: 434 EAGRNAALFSLTDPFDEAGQRRMDQILDAIYADFTGKAAAGRGLSPEAIEEAARGRVWTG 493

Query: 524 AQAKDHGLVDAFGGMQEAVADAASRAKL 551
             A  HGLVDA GG+Q A+  A + A L
Sbjct: 494 EDALAHGLVDALGGLQTAIELARTEAGL 521



 Score = 58.9 bits (141), Expect = 6e-13
 Identities = 56/247 (22%), Positives = 107/247 (43%), Gaps = 15/247 (6%)

Query: 343 GEISG-GEQPAGRIGGESTAALLRQARDDEEIKAVVLRVDSPGGEVFASEQIRREVVALK 401
           G +SG GE+P+ R   E   A    A  D  +K +++R+      +  ++++R+ ++A +
Sbjct: 65  GFLSGEGERPSLRAVTEGLIA----AASDPTVKGLMVRIGEGSLGMAQAQELRQAILAFR 120

Query: 402 QAGKPVVVSMGDLAASGG----YWISMNADRIYADPSTISGSIGIFGMVPNLTRALDKIG 457
            +GKP +     +   G     Y+++   + ++  PS + G+ G    +P + + LD +G
Sbjct: 121 ASGKPSIAYAETIGEFGQGTVPYYLASAVEDVWLQPSGMLGTTGFAVRMPFVRKLLDDLG 180

Query: 458 VHTDGVGTTRF--AGAFDITRPLDPAAGQVIQAVINKGYADFTGKVAQARHQSVEAIDKV 515
           +    +    F  A A      + PA      A++          VA+AR  S + +  +
Sbjct: 181 ILPQFIARKEFKDAAATATQYGMSPAQEISFGALVQGWSGQVVRAVAEARGLSEDQVRGL 240

Query: 516 ARGRVWSGAQAKDHGLVDAFGGMQEAVADAASRA----KLSKGKFRVRYVEKAATPFSQF 571
                   A+A + GL+D  G   EA      RA     LS G++  R  +    P ++ 
Sbjct: 241 IDRSPLLAAEALESGLIDRLGYPDEARKAMGERAGTDEHLSVGQYAERQAKAKPAPGAKG 300

Query: 572 MSGFAGS 578
           ++  A S
Sbjct: 301 LALIAAS 307