Pairwise Alignments

Query, 633 a.a., protease IV from Xanthomonas campestris pv. campestris strain 8004

Subject, 613 a.a., signal peptide peptidase SppA, 67K type (RefSeq) from Shewanella loihica PV-4

 Score =  417 bits (1072), Expect = e-121
 Identities = 250/617 (40%), Positives = 357/617 (57%), Gaps = 21/617 (3%)

Query: 14  FVGLWDVMNFTRRLIFNLVFFGFLFLLLLLFVVAIARGDGTKPLAARTTLVIAPEGTLVE 73
           F  LW V+N TR++I NL FFGF+ LL ++       G+ +  +   + LV+   G +VE
Sbjct: 12  FSTLWKVVNTTRKVILNLFFFGFIALLFVILA-----GEESPTVEEGSALVLDLSGNVVE 66

Query: 74  QF-SADPVSRSLAKAVGDKSAEEVQLRDLVRVIEAAGKDSKIERVLLNLDKLQPSGFASQ 132
           Q    DP+  ++    G +S  E+ L DL+  I+ A  D +I  ++L++  L+ +G +  
Sbjct: 67  QKRQVDPIEAAMKSGKGGQSDGEILLADLLNAIDNAASDKRISALVLDIGHLRWTGISKL 126

Query: 133 REVAKALQGLRASGKQIVAFSESMSQGQYLLAAQANEVYLDPMGSVLLEGLGRYRQYFRE 192
           + +  AL   +ASGK I+A      Q QY LA+ A+ +YL+P GSV +EGL RYRQYF+ 
Sbjct: 127 QSIGDALTRFKASGKPIIAMGNWYGQNQYFLASFADTIYLNPQGSVEIEGLSRYRQYFKS 186

Query: 193 GLQDKLGVDVHLFRVGEYKSAAEPYILDAASADAKEADLFWMNDVWQRYLADVATARKLS 252
            L DKL +  H+FRVG +KSA EP++ D  S  AK A+   + D+W  + A V+  R + 
Sbjct: 187 AL-DKLKIKAHVFRVGTFKSAVEPFMRDDMSEAAKSANRELLQDIWDSFEATVSENRGIK 245

Query: 253 PAQLAAGIDTLPEGVTAAGGDLAKFALQQKLVDGLKTREQVDSLLTERGVADNDADGGFR 312
              L    +     +  A G  ++ A+    VD L + EQ    + ER V +      F+
Sbjct: 246 QDDLMLSAERYLTELNKANGRSSEMAINLGWVDKLASAEQFRLDMVER-VGEAKEGHSFK 304

Query: 313 SIDFGSYLTQLQAQHSPMDSRPQVAVVVAAGEISGGEQPAGRIGGESTAALLRQARDDEE 372
            I F  Y + +Q Q  P+     V ++VA G I  G Q AG+IGGEST+ALLR+AR D++
Sbjct: 305 QISFYDYQSVIQ-QFPPVLMHDAVGIIVAKGNILNGHQAAGQIGGESTSALLRKARFDDK 363

Query: 373 IKAVVLRVDSPGGEVFASEQIRREVVALKQAGKPVVVSMGDLAASGGYWISMNADRIYAD 432
           +KAVVLRVDSPGG  FASEQIR+EV+ALK A KPVVVSMG  AASGGYWIS +AD IYA 
Sbjct: 364 VKAVVLRVDSPGGSAFASEQIRQEVLALKAANKPVVVSMGTYAASGGYWISASADYIYAT 423

Query: 433 PSTISGSIGIFGMVPNLTRALDKIGVHTDGVGTTRFAGAFDITRPLDPAAGQVIQAVINK 492
           P+T++GSIGIFGM+     +L ++G+HTDGV T+ +  AF  T+ +     ++IQ  I +
Sbjct: 424 PTTLTGSIGIFGMMTTFEDSLAELGIHTDGVSTSGWT-AFSSTQGISDELKEIIQRHIER 482

Query: 493 GYADFTGKVAQARHQSVEAIDKVARGRVWSGAQAKDHGLVDAFGGMQEAVADAASRAKLS 552
           GY DF   V++ R    E +DK+A+GRVWSG +A + GLVD  G +++AV  AA  AKL 
Sbjct: 483 GYQDFISLVSEERGMKPEEVDKIAQGRVWSGKRALELGLVDELGDLEQAVTKAAELAKLE 542

Query: 553 KGKFRVRYVEKAATPFSQFMSGFAGSRLGAWMLSDSGMARALLARSLPEVDTQLRFVEDA 612
             KF  + +E+  +P  QF+       +       S M ++L   SL  ++  L  V   
Sbjct: 543 --KFDTKLIEQELSPQEQFIQQMFAQAV-------SYMPQSLSQSSL--IEQLLGEVSSV 591

Query: 613 VHDSKAGGTPVKALAYC 629
           V +  A   P     YC
Sbjct: 592 VEEFNAFDDPNGIYLYC 608