Pairwise Alignments

Query, 633 a.a., protease IV from Xanthomonas campestris pv. campestris strain 8004

Subject, 592 a.a., protease IV (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  275 bits (704), Expect = 3e-78
 Identities = 204/595 (34%), Positives = 313/595 (52%), Gaps = 31/595 (5%)

Query: 19  DVMNFTRRLIFNLVFFGF-LFLLLLLFVVAIARGDGTKPLAARTTLVIAP-EGTLVEQFS 76
           D + FT   +  ++     LF++ ++ +  I     T+ +  + ++++    G LVE+  
Sbjct: 3   DFLKFTLATVTGIILSSIVLFIIGMVTLFGIVSTADTETIVKKNSVMMLDLNGVLVERTQ 62

Query: 77  ADPVSRSLAKAVGDKSAEEVQLRDLVRVIEAAGKDSKIERVLLNLDKLQPSGFASQREVA 136
             P+   L++   D S     L D++  I+ A ++  I+ + L    L  S +AS +E+ 
Sbjct: 63  ESPLG-ILSQLFSDDS-NTYGLDDILSSIKKAKENENIKGIYLQASMLGTS-YASLQEIR 119

Query: 137 KALQGLRASGKQIVAFSESMSQGQYLLAAQANEVYLDPMGSVLLEGLGRYRQYFREGLQD 196
            AL   + SGK I+A+ +S +QG Y L++ A++V L+P G +  +G+     ++++ LQ 
Sbjct: 120 NALLDFKESGKFIIAYGDSYTQGLYYLSSVADKVLLNPKGMIEWKGIASAPLFYKDLLQ- 178

Query: 197 KLGVDVHLFRVGEYKSAAEPYILDAASADAKEADLFWMNDVWQRYLADVATARKLSPAQL 256
           K+GV++ +F+VG YKSA EP+I    S   +E    ++N +W +    V+ +R L    L
Sbjct: 179 KIGVEMQIFKVGTYKSAVEPFISTEMSPANREQVTAFINSIWGQVTEGVSASRSLPVDSL 238

Query: 257 AAGIDTLPEGVTAAGGDLAKFALQQKLVDGLKTREQVDSLLTERGVADNDADGGFRSIDF 316
            A  D +     A      + ++Q  L D L  R  V + L +    D   D     +  
Sbjct: 239 NALADRMLMFYPA------EESVQCGLADTLIYRNDVRNYLKQW--VDLKEDDRLPVLGL 290

Query: 317 GSYLTQLQAQHSPMDSRPQ-VAVVVAAGEI---SGGEQPAGRIGGESTAALLRQARDDEE 372
              +     ++ P D     VAV  A+GEI   SG       I G      LR+ +DDE+
Sbjct: 291 SDMINV--KKNMPKDKSGNIVAVYYASGEITDYSGSSTSEEGIVGTKVIRDLRKLKDDED 348

Query: 373 IKAVVLRVDSPGGEVFASEQIRREVVALKQAGKPVVVSMGDLAASGGYWISMNADRIYAD 432
           +KAVVLRV+SPGG  FASEQI   V  LK   KPV+VSMGD AASGGY+IS  AD I A+
Sbjct: 349 VKAVVLRVNSPGGSAFASEQIWHAVKELKTE-KPVIVSMGDYAASGGYYISCVADTIVAE 407

Query: 433 PSTISGSIGIFGMVPNLTRALDKIGVHTDGVGTTRFAGAFDITRPLDPAAGQVIQAVINK 492
           P+T++GSIGIFGMVPN+    +KIG+  D V T +F+   +I RP +     ++Q +I +
Sbjct: 408 PTTLTGSIGIFGMVPNVKELSEKIGLTYDVVKTNKFSDFGNIMRPFNQDEKTLMQMMITQ 467

Query: 493 GYADFTGKVAQARHQSVEAIDKVARGRVWSGAQAKDHGLVDAFGGMQEAVADAASRAKLS 552
           GY  F  + A+ RH S EAI+K+A GRVW+G  AK+ GLVD  GG+  A+  A  +A + 
Sbjct: 468 GYDTFVNRCAEGRHMSKEAIEKIAEGRVWTGEAAKELGLVDVLGGIDTALEIAVRKAGI- 526

Query: 553 KGKFRVRYVEKA--------ATPFSQFMSGFAGSRLGAWMLSDSGMARALLARSL 599
           +G   V Y  K           P +   S    S+LG +     GM + L  RS+
Sbjct: 527 EGYTVVSYPAKQDLLSSLLNTKPTNYVESQILKSKLGEY-YQQFGMLKNLKERSM 580