Pairwise Alignments

Query, 429 a.a., Lipid A core - O-antigen ligase and related enzymes from Xanthomonas campestris pv. campestris strain 8004

Subject, 399 a.a., polymerase from Vibrio cholerae E7946 ATCC 55056

 Score = 53.9 bits (128), Expect = 9e-12
 Identities = 72/297 (24%), Positives = 132/297 (44%), Gaps = 32/297 (10%)

Query: 136 FAAMLVAILQ--VMNGAERAEGWTNAIVFADIALMLLVVAIFCRPNGQVR---WLLGAAV 190
           F A+  A  Q  ++N   R +G+  +I F  +A  L +++ F     Q R   +L  + V
Sbjct: 117 FGALAFAFYQFFILN-MPRVDGFLFSINFGYLAAALAILS-FGLSFTQTRFKYYLYLSVV 174

Query: 191 AAVAVIVLSGSRGVWLSLLVT--LGVLVWGAPWQSARMRLLAFVGGAVVCVGLVLSVPGL 248
           AA    +L+ +RG  L+LL    L  +V     +  +  +   +   +V V    S P +
Sbjct: 175 AATVATILTLTRGAILTLLFVFILFFIVNVRKIKFKQTLVFTLISFLLVSVSYQFS-PRI 233

Query: 249 TEQLRIGELQSDFQRYEVGD-------ADSSAGARIERLHVAWDTLQAHPLTGVGVGRFD 301
            E++       DF  +E+         A +S+G R++  + A +  + +P+ G      +
Sbjct: 234 QERV-------DFTIFEISSIASNNIHAAASSGGRLQLWYAAVEAFKHNPIWGTTYSERE 286

Query: 302 DAMRELPLCAG--DTWLLRCHLGHAHNDLAEWGATQGIPGLLLLIAVYGVPLWMFVRLHR 359
               EL    G  D W      GHAH+   E  A+ G  G+L + A+  +P  +F+  +R
Sbjct: 287 SLNIEL-FKEGKVDEWTSTVPRGHAHSQYFEAIASNGTLGILAIFAMLILPFGVFLNDYR 345

Query: 360 RSGQRQFRGPAAAGVMIVISYALCGLTQSMFAHQVSASFYAAMVGIL-AGLAARQAQ 415
           ++G       +  G +    + +  LT++     +  +FY  MV I  A +AA++A+
Sbjct: 346 KTGS----PISQTGYLFAFGFIIFCLTEAPLQANLIGTFYGFMVAIFYAYIAAKRAK 398