Pairwise Alignments

Query, 429 a.a., Lipid A core - O-antigen ligase and related enzymes from Xanthomonas campestris pv. campestris strain 8004

Subject, 641 a.a., O-antigen polymerase from Caulobacter crescentus NA1000

 Score = 57.0 bits (136), Expect = 2e-12
 Identities = 61/237 (25%), Positives = 105/237 (44%), Gaps = 17/237 (7%)

Query: 189 AVAAVAVIVLSGSRGVWLSLLVTLGV-LVWGAPWQSARMRLLAFVGGAVVCVGLVLSVPG 247
           AV AVA +  +GSRG   + +V L + L+W    Q  R R++  +GGA V    +L+  G
Sbjct: 240 AVFAVA-LAFTGSRGGVFATVVALAIFLIWQVLAQGKRARVVVMIGGAAV----LLAAVG 294

Query: 248 LTEQLRIGELQSDFQRYEVGDADSSAGARIERLHVAWDTLQAHPLTGVGVGRFDDAMREL 307
           L   +R  ++ +   R E  D D +    I   H  W   +A P  G G+G F  A+ ++
Sbjct: 295 LA--MRSADITA--ARLENLDGDVATRQTIFAAH--WQAFKASPWFGYGLGSF-PAVNQM 347

Query: 308 PLCAGDTWLLRCHLGHAHNDLAEWGATQGIPGLLLLIAVYGVPLWMFVRLHRRSGQRQFR 367
            +   +T      +   HN   +W    G+ G L ++ + GV LW       + G     
Sbjct: 348 -VMTSETLPALFDVRATHNLYLQWLEEAGLVGALSMLGLLGVLLWQVCAAANKPGTSGAL 406

Query: 368 GPAA-AGVMIVISYALCGLTQSMFAHQVSASFYAAMVGILAGLAARQAQQHATAASP 423
             AA A   +V+ + +     ++ A  + A F   +  ++    AR+ +    +A+P
Sbjct: 407 ARAAIASTALVLLHGMSDF--AVQAPALQALFAVGLGALVTSSPARRGRLPTFSATP 461