Pairwise Alignments

Query, 253 a.a., ABC-type multidrug transport system, permease component from Xanthomonas campestris pv. campestris strain 8004

Subject, 256 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  178 bits (452), Expect = 8e-50
 Identities = 85/241 (35%), Positives = 146/241 (60%)

Query: 13  EMARAFRTLTQSIASPVLSTSLYFVVFGAAIGSRMGAIDGISYGAFIIPGLVMLSLLNES 72
           E+ R  R   Q++  P ++ +LYF++FG  IGSR+G ++G SY  +I+PGL+M+S++  S
Sbjct: 16  EINRFTRIWVQTLVPPAITMTLYFIIFGNLIGSRIGQMNGFSYMEYIVPGLIMMSVITNS 75

Query: 73  ISNASFGIYMPRWAGTIYEVLSAPVAWWEIVIGYVGAAATKSVMLGLLILLTARLFVPYE 132
            SN +   +  ++   I E+L APV  + I+ GYV     + +++G ++   + LFV  +
Sbjct: 76  YSNVASSFFSSKFQKNIEELLVAPVPNYVIIAGYVMGGVARGLLVGAMVTAVSLLFVDLQ 135

Query: 133 IAHPVWMLGFLVLTALTFSLFGFIIGIWADGFEKLQVIPLMVVTPLTFLGGSFYSINMLP 192
           + H   ++  + LT++ FSL G I  ++A  F+ + ++P  V+TPLT+LGG FYSI++LP
Sbjct: 136 VDHWGIIIATVFLTSVVFSLGGLINAVFAKTFDDISIVPTFVLTPLTYLGGVFYSISLLP 195

Query: 193 PIWQKVTLFNPVVYLISGFRWSFYGKADVHIAVSTGMTFLFLLVCLGVVAAIFRSGYRLK 252
             WQ V+  NP+VY+++ FR+ F G +DV I  S  +   F++    V   +   G  L+
Sbjct: 196 EFWQSVSKINPIVYMVNAFRYGFLGVSDVDIMTSFAVLMAFVVALYCVAHYLVTKGKGLR 255

Query: 253 A 253
           +
Sbjct: 256 S 256