Pairwise Alignments

Query, 237 a.a., Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70) from Xanthomonas campestris pv. campestris strain 8004

Subject, 239 a.a., 16S rRNA pseudouridine(516) synthase from Klebsiella michiganensis M5al

 Score =  133 bits (335), Expect = 3e-36
 Identities = 81/176 (46%), Positives = 107/176 (60%), Gaps = 10/176 (5%)

Query: 62  LLHKPSGYTCSTKDTGR--LIYEL-LPPRFRLRAPVLAPVGRLDRETSGMLLMTDDGALL 118
           +L+KP GY CST D     ++Y L +P   +L A      GRLD +T+G++LMTDDG   
Sbjct: 64  MLNKPQGYVCSTDDPDHPTVLYFLDVPVAHKLHA-----AGRLDIDTTGLVLMTDDGQWS 118

Query: 119 HRIISPKSALDKVYDVTLAEDLRGDEAALFASGTLLLEGETKPLLPAELEVLGARQARLT 178
           HRI SP+   +K Y VTL   +    A  FA G + L  E +   PA LEV+   + RLT
Sbjct: 119 HRITSPRHHCEKTYLVTLENPVDETTAEQFAKG-VQLHNEKELTKPAVLEVVTPTEVRLT 177

Query: 179 LHEGRYHQVRRMFAAAGNHVVALHRSRIGGLSLD-GLDAGHWRPLGPDDLEVLFGR 233
           + EGRYHQV+RMFAA GNHVV LHR RIG ++LD  L  G +RPL   ++  + G+
Sbjct: 178 ISEGRYHQVKRMFAAVGNHVVGLHRERIGDIALDAALAPGEYRPLTEAEIASVGGQ 233