Pairwise Alignments

Query, 515 a.a., ATP synthase alpha chain (EC 3.6.3.14) from Xanthomonas campestris pv. campestris strain 8004

Subject, 512 a.a., ATP synthase F1, alpha subunit (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  546 bits (1408), Expect = e-160
 Identities = 285/519 (54%), Positives = 370/519 (71%), Gaps = 22/519 (4%)

Query: 5   LNPSEISDLIKTRIEAVKLSAESRNEGSVTSVSDGIVRIFGLADVMQGEMIELPNNTFAL 64
           +  +EIS ++K +I+     AE    G V SV DGI R+ GL +V  GEM+E P     +
Sbjct: 3   IQAAEISAILKEQIKNFGQEAEVAEVGRVLSVGDGIARVHGLDNVQAGEMVEFPGGIRGM 62

Query: 65  ALNLERDSVGAVVLGDYENLREGDVAKTTGRILEVPVGPELLGRVVNALGEPIDGKGPLG 124
           ALNLE D+VG V+ G   +++EGD+ K T  I++VPVG  LLGRVV+ LG P+DGKGP+ 
Sbjct: 63  ALNLEIDNVGVVIFGSDRDIKEGDIVKRTKSIVDVPVGDALLGRVVDGLGNPLDGKGPIE 122

Query: 125 ATQTAPVERVAPGVIWRKSVDQPVQTGYKSVDAMIPIGRGQRELVIGDRQTGKTALAIDA 184
            T+ +  +  APG+I RKSV +P+ TG KSVDAMIPIGRGQREL+IGDRQTGKTA+A+D 
Sbjct: 123 TTERSIADVKAPGIIPRKSVHEPMATGLKSVDAMIPIGRGQRELIIGDRQTGKTAVALDT 182

Query: 185 VINQKGTG----------IKCVYVAIGQKASTVANIVRKLEENGALAHTVVVAATASESA 234
           ++NQK             + CVYVA+GQK STVA +V+KLEE GA+ +++VVAATAS+ A
Sbjct: 183 ILNQKAYNDAAGDDESKKLYCVYVAVGQKRSTVAQLVKKLEETGAIEYSIVVAATASDPA 242

Query: 235 AMQYISPYAGCTMGEYFMDRGEDALIVYDDLSKQAVAYRQISLLLKRPPGREAYPGDVFY 294
            MQ+++PYA  +M E+F D G  ALI+YDDLSKQAV+YRQ+SLLL+RPPGREAYPGDVFY
Sbjct: 243 PMQFLAPYAATSMAEFFRDNGRHALIIYDDLSKQAVSYRQMSLLLRRPPGREAYPGDVFY 302

Query: 295 LHSRLLERAARVSEEYVEKFTNGAVTGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQ 354
           LHSRLLER+A++ +++             GSLTALPIIETQ GDVSAF+PTNVISITDGQ
Sbjct: 303 LHSRLLERSAKLGDDH-----------GNGSLTALPIIETQGGDVSAFIPTNVISITDGQ 351

Query: 355 IFLETDLFNAGIRPAVNAGISVSRVGGAAQTKIIKKLSGGIRISLAQYRELAAFAQFASD 414
           IFLET+LF  GIRPAVN G+SVSRVG +AQT  +K ++G +++ LAQYRE+AAFAQF SD
Sbjct: 352 IFLETELFYQGIRPAVNTGLSVSRVGSSAQTNAMKSVAGPVKLELAQYREMAAFAQFGSD 411

Query: 415 LDEATRKQLERGQRVTELMKQKQYAPMSIANQALSIYAVNEGYLDEVPVNKLLAFEEGLH 474
           LD AT++ L RG R+TELMKQ QY+P++ A     I+A  +GYLD++PV  +  +E+GL 
Sbjct: 412 LDAATQQLLNRGARLTELMKQPQYSPLTNAEIVCVIFAGTKGYLDKIPVGDVGRYEKGLL 471

Query: 475 AHFANTQGELVSKINTTG-GWDNDIEAAFKKGIEEFKTT 512
           AH       L+  I         + E   +  ++EF  T
Sbjct: 472 AHLRGKHKGLLDYITKEDPKIKGEAEDKIRAALDEFAAT 510