Pairwise Alignments

Query, 290 a.a., O-antigen export system permease protein RfbD from Xanthomonas campestris pv. campestris strain 8004

Subject, 271 a.a., sugar ABC transporter permease from Azospirillum brasilense Sp245

 Score = 75.9 bits (185), Expect = 9e-19
 Identities = 65/249 (26%), Positives = 115/249 (46%), Gaps = 27/249 (10%)

Query: 47  NDLRLRFLRSKLGALWMIIHPLMQV----LIFATILSEVLAAKLPGVNNKFAYALYLMAG 102
           +D+R R+ RS LG  W+ +   + V    L++ T+    L   LP          +L   
Sbjct: 36  HDIRKRYRRSVLGPFWLTLSMAVLVGSLGLVYGTLFQLDLQNYLP----------FLSIS 85

Query: 103 TLCWSMFAESIGKCASLFVDNGNLMKKQAFPRICLPLIAGGTVMVNNLLLFLAIIVVFAI 162
              W++ A  + +    FV+   L+K    P     L     ++  NL+++   IV+FA+
Sbjct: 86  LATWTLIAAILNEGCMSFVELEALIKNVRIPMSVHVL----RILWRNLIIYAHNIVIFAV 141

Query: 163 LGHSLGPQAGWLPLLMLLTLAF----AMSIGLLLGIFNVFVRDIGQVVPVVLQAMFWVTP 218
           +    G   G + LL    +      A+ I LL G+     RD+  ++  V+Q +F+VTP
Sbjct: 142 VAAIFGIWPGAVGLLAFFGIGLLAVNALWIMLLFGMICTRFRDVPLIIASVIQLLFFVTP 201

Query: 219 IVYTIDILPQQTRDLFKLNPLFPLVSAYQGVLLYGRAPDWMS---LLPLTAATAILGFVS 275
           +++  +++ ++ R L  LNPL+ ++   +  LL G AP W S   ++ L  A     F+ 
Sbjct: 202 VMWKPELMGER-RGLVVLNPLYHIIELIRAPLL-GSAPSWTSWVVVILLALAGWTFTFLC 259

Query: 276 LVVFRRASA 284
              FR+  A
Sbjct: 260 YARFRKRIA 268