Pairwise Alignments

Query, 323 a.a., Tyrosine recombinase XerD from Xanthomonas campestris pv. campestris strain 8004

Subject, 298 a.a., tyrosine recombinase XerD from Pseudomonas stutzeri RCH2

 Score =  313 bits (802), Expect = 3e-90
 Identities = 166/303 (54%), Positives = 206/303 (67%), Gaps = 7/303 (2%)

Query: 21  AEDDQAIQRFLDRLWAEQGVARQTLDSYRRDLEGLARWRDGAGGGLQGADRSALFDYLRW 80
           A DD  I R+LD LW E+G+A  + ++YR DL     W    G  L  A R  + D+L W
Sbjct: 3   ALDDSVIDRYLDALWLEKGLADNSREAYRSDLALFNGWLSERGVRLAVAGREIILDHLAW 62

Query: 81  RTEARYAPRSNARLLSTLRGFYALCLRDGVRSDDPTALLDPPRLPRSLPKALTESQIDAL 140
           R    Y  RS AR LS LRGFY   LR+G  + DPT  +D PRL R LPKAL+E+ ++AL
Sbjct: 63  RLNNGYKARSTARFLSGLRGFYRYLLREGEIAVDPTLRVDLPRLGRPLPKALSEADVEAL 122

Query: 141 LAAPEIGTPLGLRDRAMLELMYAAGLRVSELVTLPAVAINLRQGVLRVTGKGSKERLVPL 200
           LAAP++G P+GLRDRAMLE++YA GLRV+EL++L    +++RQGVLR  GKG+KERLVPL
Sbjct: 123 LAAPDLGDPIGLRDRAMLEVLYACGLRVTELISLTLEQVSMRQGVLRTFGKGNKERLVPL 182

Query: 201 GEESQHWLERYLETARPTLSERKAVPAVDGQVPLFIDAARRPLSRQQFWGLVKRYAAVAG 260
           G+E+ HWLERY    R  L   KA      +  LF       ++RQ FW  +K +A VAG
Sbjct: 183 GDEALHWLERYQREGRDELLGGKA------RDVLFPSLRGDQMTRQTFWHRIKLHAKVAG 236

Query: 261 IDPDTVSPHGLRHSFATHLLNHGADLRALQMLLGHSSLSTTQIYTLVARQHLQTLHARHH 320
           I   ++SPH LRH+FATHLLNHGADLR +QMLLGHS LSTTQIYT +AR  LQ LHA+HH
Sbjct: 237 I-ATSISPHTLRHAFATHLLNHGADLRTVQMLLGHSDLSTTQIYTHIARARLQELHAQHH 295

Query: 321 PRG 323
           PRG
Sbjct: 296 PRG 298