Pairwise Alignments

Query, 323 a.a., Tyrosine recombinase XerD from Xanthomonas campestris pv. campestris strain 8004

Subject, 302 a.a., site-specific tyrosine recombinase XerD from Vibrio cholerae E7946 ATCC 55056

 Score =  290 bits (742), Expect = 3e-83
 Identities = 150/300 (50%), Positives = 200/300 (66%), Gaps = 6/300 (2%)

Query: 23  DDQAIQRFLDRLWAEQGVARQTLDSYRRDLEGLARWRDGAGGGLQGADRSALFDYLRWRT 82
           D   +++FLD +W E+G+A  T+ SYR DL  L  W       L     + L +Y  W +
Sbjct: 8   DQGLVEQFLDTMWFERGLAENTVASYRNDLSKLLEWMAQNQYRLDFISFAGLQEYQSWLS 67

Query: 83  EARYAPRSNARLLSTLRGFYALCLRDGVRSDDPTALLDPPRLPRSLPKALTESQIDALLA 142
           E  Y P S AR+LS +R  +    R+ VR+DDP+ALL  P+LP  LPK L+E+Q++ALL+
Sbjct: 68  EQNYKPTSKARMLSAIRRLFQYLHREKVRADDPSALLVSPKLPTRLPKDLSEAQVEALLS 127

Query: 143 APEIGTPLGLRDRAMLELMYAAGLRVSELVTLPAVAINLRQGVLRVTGKGSKERLVPLGE 202
           AP+  +PL LRD+AMLEL+YA GLRV+ELV+L    ++LRQGV+RV GKG KERLVP+GE
Sbjct: 128 APDPQSPLELRDKAMLELLYATGLRVTELVSLTMENMSLRQGVVRVMGKGGKERLVPMGE 187

Query: 203 ESQHWLERYLETARPTLSERKAVPAVDGQVPLFIDAARRPLSRQQFWGLVKRYAAVAGID 262
            +  W+E +L+  R  L   +    V      F  +  + ++RQ FW  +K YA +AGID
Sbjct: 188 NAIEWIETFLQQGRSLLLGEQTSDIV------FPSSRGQQMTRQTFWHRIKHYAVIAGID 241

Query: 263 PDTVSPHGLRHSFATHLLNHGADLRALQMLLGHSSLSTTQIYTLVARQHLQTLHARHHPR 322
            + +SPH LRH+FATHLLN+GADLR +QMLLGHS LSTTQIYT VA + L+ LH  HHPR
Sbjct: 242 VEKLSPHVLRHAFATHLLNYGADLRVVQMLLGHSDLSTTQIYTHVATERLKQLHNEHHPR 301