Pairwise Alignments

Query, 827 a.a., ABC transporter, permease protein, putative from Xanthomonas campestris pv. campestris strain 8004

Subject, 815 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  302 bits (774), Expect = 4e-86
 Identities = 222/784 (28%), Positives = 378/784 (48%), Gaps = 36/784 (4%)

Query: 14  EFLAGDLLTVFAALVLGVAVMTAVGTLVDRVTLALTSSAAEVLGGDLGVTGRQEIPASFA 73
           E   G L  V  AL L +A + A+  L  R+   +     + L  D        +P S  
Sbjct: 20  EIRHGQLWPVTVALTLIIASIFALTALAQRMEQVIVKQGRDALTADTVFVSGNPLPESLL 79

Query: 74  DEAQRRGLQTTRLVSFPSVLFHGESSQMANIRGVGAGYPLRGELLVSKDAAGTQAQASSA 133
               ++  QT+++  F ++ F  +  Q+  ++ V + YPLRGE+ +S         AS+ 
Sbjct: 80  TLTAQQASQTSQMTRFATMAFSDQGMQLVTVKAVDSAYPLRGEMRLSDGQQTFNHVASN- 138

Query: 134 PPPGQAYADPRLLDALGLRVGEQLEFGAGHLTITGVLRAEPDASGELMQLSPPLLVNRAD 193
               Q + +PR+ D LG+ +G+ +  G     ++G +  EP  S    Q  P + ++ +D
Sbjct: 139 ----QLWLEPRVKDQLGVDIGDNVTIGDADFVVSGEVLEEPGLSFNPFQQMPSVYIHASD 194

Query: 194 IDRAGLLGPGSRASYRLMFAGTPQAIADLRAWLKPRASEYRLVGIEDTQRGMRA--AFDR 251
           +D+ G + PGSR  + L   G   AI  ++  +   AS+       D + G R    F+R
Sbjct: 195 VDKTGAIQPGSRVQFSLFMTGDDSAIESIKQQVSLTASDRW----RDQESGSRTNEVFER 250

Query: 252 AGRFLALSALLAVLLSGVATALAANRFAMRRIDTVAVLRCLGARQRDILAMLSLQLLLTA 311
             ++L+L+  + +L++     L    +   R  T+A+L+ LGA +R +   L+LQ+ L  
Sbjct: 251 TQQYLSLTVAIVILMAATTLVLTCQHYVSTRTHTIAMLKSLGASRRWLRRWLALQVGLLL 310

Query: 312 IPACLVGIGLGMLAQEGLVQALGSLIPNRLPLPQATP---ALAGAGIGLVLLLGFGLPPL 368
           + A ++G  +G+  +  L   L  L+P+ LP     P   ALA + +  V  LG    PL
Sbjct: 311 VFAVVLGSVIGVGLESLLRLPLKDLLPDPLPSYGLRPLWIALASSFLIAVPALGI---PL 367

Query: 369 LRLRNVPPMRVLNRSFAAVPPSSLLVYAAALAATLALTVYATGNL---VLAGWVLGGLAA 425
            RL +V  + V+    A       L+        L L VY    L   VL G V+  L A
Sbjct: 368 GRLLSVSAVAVMQPVTAQTRWQRNLLLIMVPIVPLLL-VYWQNQLIWIVLIGIVV--LFA 424

Query: 426 LAVVAMLLGLGLLAALRPIQHRLRGAWKLGLASLTRRRGLSVVQLVGLSLSLCALLLLAV 485
           +  V  +L   LLA L      L  A  L L+ + R    S +Q   L+LSL  L ++ +
Sbjct: 425 MLAVVSVLVTRLLAKLP-----LNPAMALALSRINRSGAASGLQFGALALSLMLLAIIWL 479

Query: 486 VGPGLLGQWRDRLPVDTPNYFLMNIQPEQTEPVLQTLRSLGVEGAAVEPFSTGRLVAIND 545
           V   LL  W+  LP + PN F +NI   +    L  L +  +E +A  P   GRL  IN 
Sbjct: 480 VRTDLLSDWQRTLPENAPNAFALNISESEKASYLAALDTASIERSAAYPIMRGRLTHING 539

Query: 546 KPPLRGDRDPQDDGDGDNRPVNFSWRYAFPPANTLLQGKFWSADSTAPEASVEEGWAQRY 605
           +   +  ++ ++  D   R +N +W    P  N +LQG++ S +      SVE+  A   
Sbjct: 540 QEAKQYAQNGEESSDALRRELNLTWAEQLPDYNPILQGEWQSQNGV----SVEQEVASDL 595

Query: 606 QLKLGDRITLLLGEQQRSFTVTSIRKADWDSFRVNFFLLLNQGAVGDAPYNLISSFHLPP 665
            LKLGD +T ++  Q  S  V +IR+ +W   + NF+ + +   V + P + + SF + P
Sbjct: 596 GLKLGDTLTFMINSQTVSAQVNTIRQVEWREMKPNFYFIFSPDVVQNLPVSYLISFRIQP 655

Query: 666 GNAPKLATLSRDYPNISVLDIDAILGRVREVIDQVAQAVQLVMGFSLLAGVLVLLAALQA 725
            +   L  LSR +P +S++DI  +  +++ ++ Q+  +V ++    +LAGVL++   L+ 
Sbjct: 656 EHDALLGQLSRQHPTVSLMDIRTMGAKIQALLTQIVWSVTVLAALGVLAGVLLIFTLLRL 715

Query: 726 TAGERRYDSAVLRTLGARRGQLRGAVLVEFGALGLLAALLA-VTAAAVIGAVVGQQAFEI 784
           +  +R+ +  + RTLGA R ++   +  E+G + L+  L+A V+A AV+ AV+    +  
Sbjct: 716 SLSQRQQEIRLYRTLGASRRRVMHTIWAEYGVMALVGGLVASVSADAVVAAVM---KWGF 772

Query: 785 ALTP 788
           +LTP
Sbjct: 773 SLTP 776