Pairwise Alignments

Query, 804 a.a., hypothetical protein from Xanthomonas campestris pv. campestris strain 8004

Subject, 733 a.a., TonB-denpendent receptor from Herbaspirillum seropedicae SmR1

 Score = 91.3 bits (225), Expect = 2e-22
 Identities = 189/810 (23%), Positives = 307/810 (37%), Gaps = 113/810 (13%)

Query: 31  MTSARRFHVTPLALALAVL----LPVIAHAADPIPASAADAPVTPADAAGNATQLDAINV 86
           MTS+    + PLA A+A++    LP +A A     A+A D    P      +    A  +
Sbjct: 1   MTSSTPLTLHPLAAAVALIFLAPLPALAQAQ----ATAPDQQTLPTVTVNASADASADGL 56

Query: 87  VSQGSTRQVQRISRQ----DIEQLTPGSSAFKAVEKLPGVQFQSADPFGTYEWSTQV--T 140
            ++ +  QV R SR     +++ L     +    ++L  +  Q A   G    +  V  T
Sbjct: 57  PAEFAGGQVARGSRLGVLGNVDNLDSPVRSVAYTQQL--IADQQAHGVGDVLKNDPVVRT 114

Query: 141 LHGFDQSRLGYTLDGIPLGN--MSYGVTNGLHITRAIISENIGSVEIAQGAGAL---GTA 195
             GF   +  Y + G    +  + Y    G+   + + SE +  VE+  GA A     T 
Sbjct: 115 TRGFGNFQESYMIRGFIANSDDLMYNGLFGILPRQYVASEMMERVEVQYGASAFLNGATP 174

Query: 196 SNTNLGGTMQFYSADPQTTPGARLVQTVGSDATRRTFARADTGDRNGLSAYLSYANASTD 255
            +  LGGT+          P   L  T+G ++    +A  D   R G    L     +  
Sbjct: 175 GDAGLGGTINIVPKRAANEPLTDL--TLGYESGNSQYAALDVSRRFGPQERLGVRINAAR 232

Query: 256 KWKGFGDQQSEQANLKTVYQWGDGNRLSLFLDTSRRKEYDYMDLSLTSQRALGWDYDYLQ 315
              G G     +          + N  SL +D      Y   D  L++   LG   + L 
Sbjct: 233 HAGGTGVANERR----------ETNLFSLGVD------YRGNDFRLSAD--LGLQENNLS 274

Query: 316 PDWATAVQMARAYQTTGATSGVAN-GYPQSLAGLPD---------DYSWLDASYYAGGGL 365
               +    A       A SG AN G P S +   D         D S    ++ A G  
Sbjct: 275 NVRPSVTIGAGLTSLPVAPSGSANYGQPWSYSNARDLFGTVRGEWDLSSSTTAWAAFGAR 334

Query: 366 RRDNLAGLSGTFVFGGATLDAAGYYHANRGEGQWVTPYVVTSAQIPVSMRTTDYGLDRFG 425
           +      LSG  V   +T  AA Y   N                     R  D      G
Sbjct: 335 QGTENNSLSGVRVTNASTGAAATYRFDNA--------------------RQDDVATGEVG 374

Query: 426 GTSALKWSWGNHDL--EAGVWAENARTTQGRN-YFALGNEGYTSLYNVYEAQTPFRRDFQ 482
             + L+    +H L   A  ++ N+R   G +  +AL    Y        A T       
Sbjct: 375 VRTHLQTGAVSHKLVAAASAYSLNSRNAYGLSPSYALATNLYNPTNYAQPALTSLGNSLA 434

Query: 483 QRYTT-QTRML--YLQDTVRLLDDRLTVNYGAKA--LSTTTRAQSLVPTTALAQGRIRAE 537
              TT +T +L   + DT+   DDR+ V  G +   L + T A +    TA       + 
Sbjct: 435 DPQTTIKTNLLSAVVSDTLGFYDDRVLVTVGVRQQQLKSDTYAYNTQANTAHYDQSATS- 493

Query: 538 DNFLPQVGVNYKLDERQDIYASYSKNIAAFGFTPFATSQAAFDRSRSTLEPEESQTVQVG 597
               P  GV +KL +   +Y +Y + +   G     T+ A + +    L P +S+  +VG
Sbjct: 494 ----PMAGVVFKLTKTLSVYGNYIEGLQQ-GKQITDTTAANYGQ---VLAPYKSKQKEVG 545

Query: 598 YRVQDAQFQLSADAYFTKFSNRLLTTSPCTAVQTCASILSNVGAVHSAGADLALMWRPIE 657
            + +     L A A+FT       T  P +      +I +  G   + G +L       +
Sbjct: 546 VKYELGGLGLGA-AFFT-------TDRPLSYKDAVTNIEATNGKQRNRGVELTAYGEVTK 597

Query: 658 GLSWLNSLSWNRSRYQDDYLNNGVVATAGKDVVGIPALMFSSSASYQIGNLR-LDLDGK- 715
           G+  L+ L++  ++     +     A  GK  +G+P +  ++     +  +R L L+G+ 
Sbjct: 598 GVRLLSGLTFLDAKQ----VQTNSSANNGKYAIGVPRVQANAGLEVDVPGVRGLTLNGRA 653

Query: 716 -YVDKRYITFLNDSQVPSYWLFNAGARYDFGRLGGVADVALALNITNLTDKRYFASTGTN 774
            Y   +Y+   N  +VPS+  ++ GARY    +GG A V L  +I N+ ++ Y+ S G  
Sbjct: 654 TYTSTQYVDAANQLEVPSWVRYDLGARY-LTDIGGHA-VTLRASIDNVANRNYWQSAG-- 709

Query: 775 GYVASDPNGYNQTMVVGAPRQTFLSLDVKF 804
               +  +GY   +V G PR    S+ V F
Sbjct: 710 ---GASNSGY---LVAGNPRTFSTSVSVAF 733