Pairwise Alignments

Query, 804 a.a., hypothetical protein from Xanthomonas campestris pv. campestris strain 8004

Subject, 807 a.a., TonB-denpendent receptor from Herbaspirillum seropedicae SmR1

 Score =  189 bits (479), Expect = 7e-52
 Identities = 201/833 (24%), Positives = 347/833 (41%), Gaps = 97/833 (11%)

Query: 39  VTPLALALAVLLPVIAHAADPIPASAADAPVTPADAAGNATQLDAINVVSQGSTRQVQRI 98
           +T L+L ++ L    A A      +     V    +A   T      + ++ S +    +
Sbjct: 5   LTRLSLLISGLFIAGAPALAQTTTNVGTVTVQGGGSASAGTAAATGLIQAEDSPKARSSV 64

Query: 99  SRQDIEQLTPGSSAFKAVEKLPGVQFQSADPFGTYEWSTQVTLHGFDQSRLGYTLDGIPL 158
           +R+ +E+ +P S+ ++ +  LPGV     D  G +  + +V   GF+  +LG+T++G P+
Sbjct: 65  NREYMEKQSPTSNPYQMINLLPGVNTYDNDGSGLFGGNIRV--RGFNSDQLGFTINGAPV 122

Query: 159 GNMSYGVTNGLHITRAIISENIGSVEIAQGAGALGTASNTNLGGTMQFYSADPQTTPGAR 218
            +     +  ++  +    EN+  V + QG+           GG +      P+     R
Sbjct: 123 NDSG---SFAVYPQQYTDPENLCDVFVTQGSTDTEAPHVGASGGNIGMAFCAPEDQQRIR 179

Query: 219 LVQTVGSDATRRTFARADTGDR--NGLSAYLSYANASTDKWKGFGDQQSEQANLKTVYQW 276
           +    GS++  + + R D+G    N    ++SY+  + DK+KG G    +  ++ T +  
Sbjct: 180 VTNAFGSNSLWKRYVRFDSGKLLDNRFKFFISYSKTTADKFKGPGGAIKDHVDIGTNFDL 239

Query: 277 GDGNRLSLFLDTSRRKEYDYMDLSLTSQRALGWDYDY------LQPDWATAVQMARAYQT 330
           G G+ ++  L  +R+   +Y  L+ T    LG + D+       QP      Q    Y  
Sbjct: 240 GQGSFINANLLYNRQLNNNYRSLTKTQIAQLGRNADFGSIAPQHQPAVGGTAQNDTTYAP 299

Query: 331 TGATSGVANGYPQSLAGLPDDYSWL-----------------DASYYAGGGLRRDNL--- 370
             A +  ANGY      L    +WL                 D  ++ G G   + L   
Sbjct: 300 NVAANIAANGY--YAYNLNPFENWLGTINAHFQLSPTASLDIDPYFWYGFGTGANQLQTV 357

Query: 371 --AGLSGTFVFGGATLDAAGYYHANRGEGQWV-TPYVVTSAQIPVSMRTTDYGLDRFGGT 427
              G++G    GG   D         G+G  + T Y    +      RT  Y   R G T
Sbjct: 358 REGGVAGASQVGGGAADI-------NGDGDRLDTVYAYQGS------RTRTY---RPGVT 401

Query: 428 SALKWSWGNHDLEAGVWAENARTTQGRNYFALGNEGYTSLYNVYEAQTPFRR-------- 479
                   NH L AG W E AR  Q   +  + N G  ++ N+++  +            
Sbjct: 402 FKFNQQMDNHRLLAGYWVERARHQQTGPFSRVDNNG--NIANLWQDNSDLWLRNADGSIL 459

Query: 480 DFQQRYTTQT-RMLYLQDTVRLLDDRLTVNYGAKALSTTTRAQSLVPTTALAQ----GRI 534
            ++   T  T + ++LQD++ +++D+L V  G +  S+  R  +  P++  A     G  
Sbjct: 460 QYRDTLTVSTAQSIFLQDSISMMNDKLNVQVGGR-YSSIDRDFTNYPSSGAANNASAGFY 518

Query: 535 RAEDN---FLPQVGVNYKLDERQDIYASYSKNIAAFG-FTPFA--------TSQAAFDRS 582
           + + N   FLP +GV ++LD+ Q ++ + +KN  A G F+ F           Q      
Sbjct: 519 KVKKNYADFLPSLGVRFQLDDAQSVFFNAAKNFKAPGNFSYFGLLSGGTIVNGQLVGATQ 578

Query: 583 RST-LEPEESQTVQVGYRVQDAQFQLSADAYFTKFSNRLLTT-SPCTAVQTCASILSNVG 640
           R   ++ E S    +GYR    ++  SA  ++  + NR+ +  +P T  +T      NVG
Sbjct: 579 REVPVDKETSWNYDLGYRYNTEKWMASASLFYIDYHNRIASAYNPDTGNKTDY----NVG 634

Query: 641 AVHSAGADLALMWRPIEGLSWLNSLSWNRSRYQDDYLNNGV--VATAGKDVVGIPALMFS 698
              S G +L   +     LS   SLS+ +S+ + D  N+    + T+GK+    P  +  
Sbjct: 635 DATSHGMELESGYAFTRNLSMYGSLSYIKSKMKQDLRNSSTQFLPTSGKEFPDTPNWLSG 694

Query: 699 SSASYQIGNLRLDLDGKYVDKRYITFLNDSQVPSYWLFNAGARYDFGRLGGVADVALALN 758
            S  YQ     +    KY  +RY T +ND  +  Y LFNAGA   F     +    + LN
Sbjct: 695 LSLQYQQDGWYVFGQAKYTGRRYTTLVNDDALGGYTLFNAGAGMTFASTTWLKKPTVRLN 754

Query: 759 ITNLTDKRYFASTG-------TNGYVASDPNGYNQTMVVGAPRQTFLSLDVKF 804
           + NL DK+Y    G       TN    +   G + ++ +GAPR   ++L   F
Sbjct: 755 VYNLFDKQYLNLNGGSGSQFTTNAVAVNGIPGTDPSLYIGAPRTFTVTLTADF 807