Pairwise Alignments

Query, 464 a.a., DNA repair protein RadA from Xanthomonas campestris pv. campestris strain 8004

Subject, 458 a.a., DNA repair protein RadA from Vibrio cholerae E7946 ATCC 55056

 Score =  531 bits (1369), Expect = e-155
 Identities = 273/466 (58%), Positives = 347/466 (74%), Gaps = 12/466 (2%)

Query: 2   MAKAKTAYVCGECGAEYTKWQGQCTECGVWNTLSEIVLESATPAGKASPAASRRS---GW 58
           M KAK AYVC ECGA++ +WQGQC  CG WN++SE+ L        ASP  +R     G+
Sbjct: 1   MVKAKRAYVCNECGADFPRWQGQCNACGSWNSISEVRLA-------ASPQVARNERLVGY 53

Query: 59  AGKTEAPKITALKDVQQSEQARVSTGIGEFDRVLGGGLVEGAVVLIGGDPGIGKSTLLLQ 118
           AG  EA K+  L D+   E  R ++G  E DRVLGGG+V GA +LIGG+PG GKSTLLLQ
Sbjct: 54  AGALEA-KVQTLADIDLQEVPRFTSGFKELDRVLGGGIVPGAAILIGGNPGAGKSTLLLQ 112

Query: 119 ALASMASTLPVLYVTGEESLAQVAGRAVRLDLPLEGLNALAETGIENILQHASVARPKLI 178
            +  ++  +P LYVTGEESL QVA RA RL LP + L  L+ET ++ I Q A   +P+++
Sbjct: 113 TMCLLSGQMPTLYVTGEESLQQVAMRASRLGLPKQHLKMLSETNVDRICQIAEQEKPRIM 172

Query: 179 VADSVQTLWTESLTAAPGSVSQVRESAARLVRYAKETGTAVFLVGHVTKEGGIAGPRVLE 238
           V DS+Q +    + ++PGSV+QVRESA  L RYAK+   AVF+VGHVTK+G +AGP+VLE
Sbjct: 173 VIDSIQVMHVADVQSSPGSVAQVRESATALTRYAKQNNVAVFIVGHVTKDGTLAGPKVLE 232

Query: 239 HMVDAVLYFEGESGSRFRLLRAFKNRFGAVNELGVFAMGEKGLKEVSNPSAIFLSGGSTH 298
           H++D  +  +G++ SRFR LR+ KNRFGAVNELGVFAM  +G++EVSNPSAIFLS G   
Sbjct: 233 HIIDCSILLDGDTDSRFRTLRSHKNRFGAVNELGVFAMTGQGMREVSNPSAIFLSRGEEA 292

Query: 299 QPGSCVMVTREGTRPLMVEVQALVDASPLSNPRRVAVGLEQNRLAMLLAVLHRHGGIVVG 358
             GS VMV  EGTRPL+VE+QALVD S L+NPRRVAVGLEQNRL++LLAVLH+HGG+ + 
Sbjct: 293 TSGSSVMVVWEGTRPLLVEIQALVDYSQLANPRRVAVGLEQNRLSLLLAVLHKHGGLQMA 352

Query: 359 DQDVFVNVVGGIRVQETAADLPVLLAVLSSLRDRPLAEKTIAFGEVGLSGEIRPVPNGED 418
           DQDVFVNVVGG++V ET+ADL +L+A+LSS RDRPL +  + FGEVGL+GEIRPVP+G++
Sbjct: 353 DQDVFVNVVGGVKVTETSADLALLMALLSSFRDRPLPKDVVVFGEVGLAGEIRPVPSGQE 412

Query: 419 RLKEAATHGFKRAIVPKANAPKASSIKGMEIVAVERLSQALEAAAE 464
           RL EA  HGFK+AIVP AN PK   I+GM+I  V++LS A+ A  E
Sbjct: 413 RLNEAFKHGFKKAIVPIANMPK-GGIEGMQIHGVKKLSDAIAAFDE 457