Pairwise Alignments

Query, 464 a.a., DNA repair protein RadA from Xanthomonas campestris pv. campestris strain 8004

Subject, 469 a.a., DNA repair protein RadA (NCBI) from Rhodospirillum rubrum S1H

 Score =  392 bits (1008), Expect = e-113
 Identities = 214/447 (47%), Positives = 290/447 (64%), Gaps = 14/447 (3%)

Query: 2   MAKAKTAYVCGECGAEYTKWQGQCTECGVWNTLSEIVLESATPAGKASPAASRRSGWAGK 61
           MAK    +VC  CGA Y +W G+C  CG WN+++E     A P G+      +R  +   
Sbjct: 1   MAKNAPRFVCQACGAVYPRWMGRCEACGEWNSIAEEAPAEALPKGQTGGRGGQRLSFV-- 58

Query: 62  TEAPKITALKDVQQSEQARVSTGIGEFDRVLGGGLVEGAVVLIGGDPGIGKSTLLLQALA 121
                  +L+ V  +   R+ TGI E DRV GGGLV G+ +LIGGDPGIGKSTLLLQA+A
Sbjct: 59  -------SLEGVG-APPPRLLTGIPELDRVAGGGLVAGSALLIGGDPGIGKSTLLLQAVA 110

Query: 122 SMA-STLPVLYVTGEESLAQVAGRAVRLDLPLEGLNALAETGIENILQHASVARPK-LIV 179
            +A      +Y++GEE++ QV  RA+RL L    ++  A T + +I+       P  ++V
Sbjct: 111 GLARGGARSVYISGEEAIDQVRLRALRLGLEKAPVDLAAATSVRDIVATLDSGEPPDVVV 170

Query: 180 ADSVQTLWTESLTAAPGSVSQVRESAARLVRYAKETGTAVFLVGHVTKEGGIAGPRVLEH 239
            DS+QT++ ++L +APG+V+QVR  +  L+R AK  G  +FLVGHVTKEG +AGPRV+EH
Sbjct: 171 IDSIQTMYLDTLDSAPGTVAQVRAGSHELIRLAKRRGFVLFLVGHVTKEGQMAGPRVMEH 230

Query: 240 MVDAVLYFEGESGSRFRLLRAFKNRFGAVNELGVFAMGEKGLKEVSNPSAIFLSGGSTHQ 299
           MVDAV+YFEGE G  FR+LRA KNRFGA +E+GVF M + GL EV NPSA+FL+    + 
Sbjct: 231 MVDAVIYFEGERGHPFRILRAVKNRFGATDEIGVFEMSDAGLSEVPNPSALFLAERRGNV 290

Query: 300 PGSCVMVTREGTRPLMVEVQALVDASPLSNPRRVAVGLEQNRLAMLLAVLHRHGGIVVGD 359
            GSCV    EGTRP++VE+QALV  S   + RR  VG +  RLAM++AVL    G+ +G 
Sbjct: 291 TGSCVFAGMEGTRPMLVEIQALVGPSAPGSARRAVVGWDGGRLAMVMAVLETRCGLALGG 350

Query: 360 QDVFVNVVGGIRVQETAADLPVLLAVLSSLRDRPLAEKTIAFGEVGLSGEIRPVPNGEDR 419
            DV++NV GG+R+ E AADL V  A++SS    P+    + FGE+GLSGEIR V +G+ R
Sbjct: 351 NDVYLNVAGGLRIGEPAADLAVAAALVSSFSGVPVPPDMVVFGEIGLSGEIRAVAHGDTR 410

Query: 420 LKEAATHGFKRAIVPKANAPKASSIKG 446
           LKEAA  GF +A++P    P+ S  +G
Sbjct: 411 LKEAAKLGFDQALMPA--RPRDSGKRG 435