Pairwise Alignments

Query, 525 a.a., Serine protease precursor MucD/AlgY associated with sigma factor RpoE from Xanthomonas campestris pv. campestris strain 8004

Subject, 456 a.a., serine endoprotease DegQ from Vibrio cholerae E7946 ATCC 55056

 Score =  279 bits (714), Expect = 1e-79
 Identities = 194/517 (37%), Positives = 281/517 (54%), Gaps = 75/517 (14%)

Query: 12  LLAMTLPLAACAQQPEAPAKTSAPIAANRSTTPAPQLVAGLPDFTNLVEQVGPGVVNIET 71
           L A++L L+A       PA  + P++ N            +P    ++E+V P VV+I  
Sbjct: 9   LTALSLSLSAILSP--LPATAALPLSVNGEQ---------IPSLAPMLEKVTPAVVSIAV 57

Query: 72  TITRKDAMARSQRGGPGGRGGGAMPDDEQMPEFFKRFFGPDF---QMPGGPRQGPGQGDD 128
                                G     +++P+ F+ FFGPDF   Q+   P +G      
Sbjct: 58  E--------------------GTQVSRQRLPDQFRFFFGPDFPTEQLQERPFRG------ 91

Query: 129 DGGIAGKSMGSGFIISAD-GYVLTNHHVVDGASEVTVKLTDRREFKAKVVGSDEQFDVAL 187
                   +GSG II+AD GYV+TN+HV++GA ++ VKL D REF A++VG DE  DVAL
Sbjct: 92  --------LGSGVIINADKGYVVTNYHVINGAEKIRVKLYDGREFDAELVGGDEMSDVAL 143

Query: 188 LKI-EAKGLPTVRIGDSNTLKPGQWVVAIGSPFGLDHSVTAGIVSATGRSNPYADQRYVP 246
           LK+ +AK L  +RI DS+ L+ G + VAIG+PFGL  +VT+GIVSA GRS    +  +  
Sbjct: 144 LKLNKAKNLTEIRIADSDKLRVGDFAVAIGNPFGLGQTVTSGIVSALGRSGLNIEN-FEN 202

Query: 247 FIQTDVAINQGNSGGPLLNTRGEVVGINSQIFSASGGYMGISFAIPIDLAFSAAEQIKAS 306
           FIQTD AIN GNSGG L+N  GE++GIN+ I   +GG +GI FAIP ++  +  +QI   
Sbjct: 203 FIQTDAAINSGNSGGALVNLNGELIGINTAILGPNGGNVGIGFAIPSNMMKNLTDQILEF 262

Query: 307 GHVSRGMLGVAVGPIDTLKAQGLGLPDTRGALVNDIPAGSPAGKAGIEVGDVIRSVNGKE 366
           G V RGMLGV  G I +  A  LG   ++GA V+ +   S A KAGI+ GD+I S+NGK+
Sbjct: 263 GEVKRGMLGVQGGEITSELADALGYESSKGAFVSQVVPDSAADKAGIKAGDIITSLNGKK 322

Query: 367 IAVASDLPPMIGLMPPGTKVSLNVLRDGKPRQVTVTLGTLENESGSSAPRTAADDSKPSA 426
           I   S+L   +  +  G  ++L VLRDGK + + VTLG  +N       +T A+      
Sbjct: 323 IDTFSELRAKVATLGAGKTITLGVLRDGKNQNIDVTLGEQQN------AKTKAESLHQ-- 374

Query: 427 PASVELLGLQVADLTAAERSRMGLEAGEGVRIASV-TGSAARSTQPPLAPGLVIARVGRT 485
                  GL  A+L+    S    +  +GV++  V  GSAA S Q  L    +I  V R 
Sbjct: 375 -------GLSGAELSNTTDS----DPIQGVKVTEVQKGSAAESYQ--LQKDDIIIGVNRK 421

Query: 486 KVGSVAELNRALASYKKGDVVMLLVTDGKATSYVALK 522
           +V ++AEL   +   K  +++ L +  G+ T Y+ ++
Sbjct: 422 RVKNIAELRAIME--KSPNILALNIQRGERTLYLVVR 456