Pairwise Alignments

Query, 444 a.a., 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) from Xanthomonas campestris pv. campestris strain 8004

Subject, 431 a.a., 23S rRNA (uracil-5-)-methyltransferase RumA from Dechlorosoma suillum PS

 Score =  352 bits (903), Expect = e-101
 Identities = 191/429 (44%), Positives = 258/429 (60%), Gaps = 6/429 (1%)

Query: 17  ITDLSHDGRGVARRDGEGGKVTFISGALPGEVVVAEPTARSRHFDEAKTVEVLQASPQRV 76
           I  L HD RGV R +G   K  F+ GALPGE V         ++   +   VL+ S  RV
Sbjct: 6   IESLDHDARGVTRLEG---KTVFVEGALPGETVEYALFREKPNYAVGEVSAVLRPSCARV 62

Query: 77  APRCPHFGVCAGCVLQHLEESQQIVAKQRVLMDNLERIGHVTPQTVLPALVGDTWGYRRK 136
            PRCPHFG C GC +QHLE + Q+ AKQR+L +NL  +  + P+ V   + G TWGYR +
Sbjct: 63  PPRCPHFGTCGGCSMQHLEPTAQVAAKQRLLENNLWHLARLKPEQVYNPIYGPTWGYRHR 122

Query: 137 GRFSVRRVEKKDKTLVGFRELDPRFVADLSVCYTVIPQIGEKIPQLAALVEGMDGKRDIP 196
            R +VR VE K   LVGF E    +VADL  C  +   + + +  L  L   +  +  +P
Sbjct: 123 ARLTVRMVESKG-MLVGFHEKRSSYVADLHTCPILPAHVSDLLVPLRQLFVRLSIRDRLP 181

Query: 197 QIEFIAGDDAVALTIRHLQPLSARDEQALVEFAQAHDFAIFLQPGGVDSVHPLWPQEVP- 255
           Q+E   G+    + +R L+PLS  DE+ L  FA  H    FLQP G  S +   P + P 
Sbjct: 182 QVEIAVGEKCTVMVLRILEPLSGADEKLLRAFADEHGIVFFLQPKGPASAYRFHPVDGPD 241

Query: 256 LSFRLPKWDVELAFRPLDFIQVNASLNQKMIAHALALLDAKPDDRVLDLFCGLGNFTLPL 315
           LS+ LP++ +E+ F P +F QVN  +NQ +I  A+ LLD +P +R+ DLFCGLGNFTLP+
Sbjct: 242 LSYLLPEFGLEMRFSPTEFTQVNPGINQMLIRRAMRLLDPQPGERIADLFCGLGNFTLPI 301

Query: 316 ARTVREVVGVEGDAGLVARARENAQRNGL-DNAQFYAADLTQDQRQTAWMRQGFDKLLLD 374
           AR+   VVGVEG   L  RA ENA  NGL  N  F  A+L +   ++      FDK+L+D
Sbjct: 302 ARSGARVVGVEGLKELTRRAEENAAANGLAANVSFGVANLFECTPKSLGALGHFDKMLID 361

Query: 375 PPRSGAIDVLQQLPLKQFKRIVYVSCHPGSLARDAGYLVNEQGFSLLSAGAMDMFPHTAH 434
           PPR GA++V++ L      RIVYVSC+P +LARDA  LV+++G+    AG ++MFPHT+H
Sbjct: 362 PPREGAVEVVKALGEDSPGRIVYVSCNPSTLARDAAILVHQKGYRFSGAGIVNMFPHTSH 421

Query: 435 VESIAVFEK 443
           VESIA+FEK
Sbjct: 422 VESIALFEK 430