Pairwise Alignments

Query, 830 a.a., FIG003033: Helicase domain protein from Xanthomonas campestris pv. campestris strain 8004

Subject, 820 a.a., ligase-associated DNA damage response DEXH box helicase from Pseudomonas sp. BP01

 Score =  739 bits (1908), Expect = 0.0
 Identities = 423/819 (51%), Positives = 526/819 (64%), Gaps = 28/819 (3%)

Query: 17  AWFAQRGWAPLPFQRDVWKRYLDGESGLLHTPTGSGKTLAAFGGPLLEALAARGRTPPAT 76
           AWFA+RGW P  FQR VW     GESGLLH  TG+GKT A +    L AL A    P   
Sbjct: 10  AWFAKRGWKPFAFQRRVWAAVERGESGLLHASTGAGKTYAVW----LAALRAFKALPQG- 64

Query: 77  AVARGRRQPQRSLQVLWITPLRALAADTARALREPVEALGLDWQVGLRTGDASARDKRLA 136
                 RQP  +LQV+W+TP+RALAADTARAL+ P++ LGL W VG+R+GD  + ++   
Sbjct: 65  ------RQPV-ALQVVWVTPMRALAADTARALQAPLDELGLPWSVGVRSGDTGSAERARQ 117

Query: 137 RSGKLDVLVTTPESLALLLSYPDTAPQLAALRCVIVDEWHELLGNKRGVLLQLCLARLRS 196
                 VLVTTPESL LLL+        A LR V+VDEWHELLGNKRGV LQL LA LR 
Sbjct: 118 ARRLPSVLVTTPESLTLLLTRAQAREDFATLRLVVVDEWHELLGNKRGVQLQLALAHLRQ 177

Query: 197 WSPALRIWGLSATLGNLAQARDVLLPHQPDAALVSGVKPRAMTLETLLPETGERFPWAGH 256
           W PAL  WGLSATLGNL  A DVLLP      LV G + + + ++TLLP   ERFPWAGH
Sbjct: 178 WHPALPTWGLSATLGNLRHALDVLLPQ--GGLLVEGRQDKTLQVDTLLPAAIERFPWAGH 235

Query: 257 LGLAQLARVLHKLMEQRTSLVFTNTRAQAELWHQALSAVWPEDAATLALHHGSLDPALRT 316
           +GL  L +V H++    + LVFTNTRAQAELW+QAL    P+ A  +ALHH SL    R 
Sbjct: 236 MGLKMLEQVSHEIDTSASCLVFTNTRAQAELWYQALLEARPDWAGLIALHHASLARDTRD 295

Query: 317 AAEHGLRDGSLRCVVATSSLDLGVDFPAVDQVLQVGSPKGIARLLQRAGRARHRPGESGH 376
             E  L+ G+L+ V+ TSSLDLGVDF  V++VLQ+GS KGIARL+QRAGR+ H PG    
Sbjct: 296 WVERSLKQGNLKAVICTSSLDLGVDFLPVERVLQIGSAKGIARLMQRAGRSGHAPGRRSR 355

Query: 377 VVCVPSHALELLEYAAARRAIAQGQIETRPPPRLSLDVLAQHCVTLALGGGFQADALLRE 436
           +  VP+H+LEL+E AAAR+A+A G IE R  PRL +DVL QH V++ALG GF+A+ LL E
Sbjct: 356 ITLVPTHSLELVEAAAARQALAAGHIEARFSPRLCMDVLVQHLVSMALGSGFRAEKLLAE 415

Query: 437 VRGTDAFATLDEATWQAVLDFIVQGGSALAHYPDFHKVVRDDAGIYRVTDRRVALRHRLS 496
           VR T AFA L ++ WQ  LDF+  GG +L+ YPD+ +V R   G YRV   R+A RHR+ 
Sbjct: 416 VRSTWAFAELRDSQWQWALDFVCHGGGSLSAYPDYQRVERQADGTYRVPSERLARRHRMG 475

Query: 497 IGTITSDGSVRVQFLR----GGRLGAVEEQFVGRLKRGDRFQFAGRLLELVRLEDMTAYV 552
           IGTI SD  +++++      G  LG+VEE F+ RL+ GD   F GR+LELVR+E+MTAYV
Sbjct: 476 IGTIVSDAHLQLKYWSKGGGGKTLGSVEEAFISRLRPGDTLVFGGRVLELVRVENMTAYV 535

Query: 553 RIAKGGSGVVPKWMGGRMPLSS----ALGREVEAVFADPGDAPEMHTLAPLLQLQSSLSA 608
           R +      V +W GGRMPLSS    AL  +++A      D PEM  + PLL LQ+  SA
Sbjct: 536 RRSTARKAAVARWNGGRMPLSSELADALVEQLDAAAHKRFDGPEMRAVRPLLALQAQWSA 595

Query: 609 LPGPGHLLVETIKARDGRHLFVYPFAGRQVNEGLAALLAARWGRRQRNTFSFAANDYGF- 667
           LP  G LL ET K+R G HLF+YPFAGR  N GLA L+A R  R Q  + S A NDYGF 
Sbjct: 596 LPTTGTLLAETFKSRQGWHLFMYPFAGRMANLGLANLIAWRVSRVQPLSVSIAVNDYGFE 655

Query: 668 VLSPAQDVPVD-AALLQELLSPARLFEDLRDSLNLGELARRQFREIARVAGLLSPSLPGR 726
           +LSP     VD AA L + L+   L ED+  SLN GE+A R+FREIA++AGL+    P  
Sbjct: 656 LLSPGN---VDWAAYLPQALATEHLLEDVLASLNAGEMALRRFREIAQIAGLVFGGYPA- 711

Query: 727 APRSLRQLQASSGLLYDVLQRFDPEHLLLAQAEREVFEGQLEFARLASALEDCAARVLRL 786
           A +S RQ+QASSGL Y+V ++ D ++LLL QA  EV   +LE  RL   L    +  L L
Sbjct: 712 AQKSTRQIQASSGLFYEVFRKHDADNLLLGQARDEVLSEELEIERLHQQLLKMGSLQLDL 771

Query: 787 CTPRSLTPLSFPLWAERVRGQLSTEDWKARVLRAAAQLE 825
              +   PL+F L  E +R  LSTE    R+ R  A LE
Sbjct: 772 RLLKRPGPLAFALLVEGMRETLSTEKLADRIARMVADLE 810