Pairwise Alignments

Query, 830 a.a., FIG003033: Helicase domain protein from Xanthomonas campestris pv. campestris strain 8004

Subject, 826 a.a., ligase-associated DNA damage response DEXH box helicase from Pseudomonas fluorescens SBW25-INTG

 Score =  776 bits (2003), Expect = 0.0
 Identities = 426/824 (51%), Positives = 535/824 (64%), Gaps = 16/824 (1%)

Query: 11  PLQQWRAWFAQRGWAPLPFQRDVWKRYLDGESGLLHTPTGSGKTLAAFGGPLLEALAARG 70
           P+   + WFA +GW P  FQ+DVW    DG SGLLH  TG+GKT A +   L      R 
Sbjct: 4   PIDFAKQWFAAKGWKPFAFQKDVWAAVKDGRSGLLHASTGAGKTYALWFAALNRFALTR- 62

Query: 71  RTPPATAVARGRRQPQRSLQVLWITPLRALAADTARALREPVEALGLDWQVGLRTGDASA 130
             PP T     R+ P   L VLWITP+RALAADTARAL  P+EAL + W +GLRTGD S+
Sbjct: 63  --PPVTGK---RKPPAEPLTVLWITPMRALAADTARALEAPLEALQIPWSIGLRTGDTSS 117

Query: 131 RDKRLARSGKLDVLVTTPESLALLLSYPDTAPQLAALRCVIVDEWHELLGNKRGVLLQLC 190
            ++      +   LVTTPESL L+L+  D+   LA LR V+VDEWHEL+GNKRGV LQL 
Sbjct: 118 SERARQTRRQPTALVTTPESLTLMLARADSEASLAHLRMVVVDEWHELIGNKRGVQLQLA 177

Query: 191 LARLRSWSPALRIWGLSATLGNLAQARDVLLPHQPDAALVSGVKPRAMTLETLLPETGER 250
           LARLR W P L +WG+SATLGN   A +VL+P Q     V G   + + ++TLLP   ER
Sbjct: 178 LARLRRWHPELMVWGISATLGNQPHALEVLVP-QGGGINVQGQTVKRLEVDTLLPPVAER 236

Query: 251 FPWAGHLGLAQLARVLHKLMEQRTSLVFTNTRAQAELWHQALSAVWPEDAATLALHHGSL 310
           FPWAGH+GL  L +V+ ++   R+ LVFTNTRAQ+E+W+QAL    P+ A  +ALHHGSL
Sbjct: 237 FPWAGHIGLKMLPQVVAEVDASRSCLVFTNTRAQSEIWYQALLDARPDWAGVIALHHGSL 296

Query: 311 DPALRTAAEHGLRDGSLRCVVATSSLDLGVDFPAVDQVLQVGSPKGIARLLQRAGRARHR 370
               R   E  L+DG L+ VV TSSLDLGVDF  V++VLQ+GS KG+ARL+QRAGR+ H 
Sbjct: 297 SRETRDWVERALKDGQLKAVVCTSSLDLGVDFLPVERVLQIGSAKGVARLMQRAGRSGHA 356

Query: 371 PGESGHVVCVPSHALELLEYAAARRAIAQGQIETRPPPRLSLDVLAQHCVTLALGGGFQA 430
           PG    V  VP+H+LEL+E AAA+ AIAQ +IE R  P   LDVL QH V++ALGGGF  
Sbjct: 357 PGRPSRVTLVPTHSLELVEAAAAQDAIAQRRIEARESPHKPLDVLVQHLVSMALGGGFTP 416

Query: 431 DALLREVRGTDAFATLDEATWQAVLDFIVQGGSALAHYPDFHKVVRDDAGIYRVTDRRVA 490
           DALL EVRG  A+  L +A W   L F+  GG +L  YPD+ +V  D+ GI+RV D R+A
Sbjct: 417 DALLTEVRGAWAYRELTDADWAWALGFVRHGGLSLTAYPDYRRVEPDEHGIWRVPDARLA 476

Query: 491 LRHRLSIGTITSDGSVRVQFLR----GGRLGAVEEQFVGRLKRGDRFQFAGRLLELVRLE 546
            RHR+S+GTI SD S+ +++      G  LG+VEE F+ RLK GD F FAGRLLELVR+E
Sbjct: 477 RRHRMSVGTIVSDASIHLKYWSKGGGGKNLGSVEEGFIARLKPGDGFLFAGRLLELVRVE 536

Query: 547 DMTAYVRIAKGGSGVVPKWMGGRMPLSSALGREV----EAVFADPGDAPEMHTLAPLLQL 602
           +MTAYVR +      VP+W GGRMPLS+ L + V    +A      D PEM  + PLLQ 
Sbjct: 537 NMTAYVRRSTAKKAAVPRWNGGRMPLSNELAQAVVERFDAAAHGHYDGPEMQAVQPLLQT 596

Query: 603 QSSLSALPGPGHLLVETIKARDGRHLFVYPFAGRQVNEGLAALLAARWGRRQRNTFSFAA 662
           Q   S LP   HLL E +K+R+G HLF+YPFAGRQV+ GLA+LLA R  +RQ  TFS A 
Sbjct: 597 QLRWSGLPTRKHLLAEALKSREGWHLFLYPFAGRQVHLGLASLLAWRVSQRQPVTFSIAV 656

Query: 663 NDYGFVLSPAQDVPVDAALLQELLSPARLFEDLRDSLNLGELARRQFREIARVAGLLSPS 722
           NDYG  L  A +V     L   LL P  L  D+  SLN GELA R+FREIAR+AGL+   
Sbjct: 657 NDYGLELLSATEVEWPELLDPTLLGPEHLLHDVSASLNAGELALRRFREIARIAGLVFAG 716

Query: 723 LPGRAPRSLRQLQASSGLLYDVLQRFDPEHLLLAQAEREVFEGQLEFARLASALEDCAAR 782
            PG AP+S RQ+QASSGL ++V +++DP++LLL QA  EV   +L+  RL   L   AA 
Sbjct: 717 YPG-APKSTRQVQASSGLFFEVFKQYDPQNLLLTQAGEEVLRDELDIRRLEETLLHMAAL 775

Query: 783 VLRLCTPRSLTPLSFPLWAERVRGQLSTEDWKARVLRAAAQLER 826
            L +      TPL+FPL  ER+R  +S+E    R+ R    LE+
Sbjct: 776 QLDVHVIERPTPLAFPLLVERMRESMSSEKLSERIARMVKDLEK 819