Pairwise Alignments

Query, 457 a.a., Virulence protein from Xanthomonas campestris pv. campestris strain 8004

Subject, 243 a.a., Type IV secretory pathway VirJ component-like protein (RefSeq) from Shewanella sp. ANA-3

 Score =  126 bits (317), Expect = 7e-34
 Identities = 68/182 (37%), Positives = 103/182 (56%), Gaps = 4/182 (2%)

Query: 270 IFVSGDGGWAGLDEEVADALVAQGIPVVGLDSLRYFWSERTPQGFATDLDRIARFYAQRW 329
           IF+SGDGGWA LD+ V   L  QG PVVG  SL+Y+W ++ P+    D   I   Y   +
Sbjct: 55  IFLSGDGGWATLDKAVGGILQQQGWPVVGWSSLKYYWKQKDPKDVTQDTLAIIDKYQAEF 114

Query: 330 QRRRVVLIGFSQGADVLPAAINKLPAPTKQNLRMTALLSVGKLADYEFHVSNWLGSDDDG 389
             ++V+LIG+S GA+V+P  +N++PA  ++N+    LLS  + +D+E HVS  + SD+  
Sbjct: 115 GTQKVILIGYSFGAEVIPFVLNEMPARYRKNVLGAVLLSPSQSSDFEIHVSEMVTSDNQS 174

Query: 390 LP--IAPEVQRLPPGITVCIYGQDDEDA--LCPSLPAETAKRVVLPGDHHFKGDYATLAK 445
                 PEV +      +C+YG++D+    LCP +       + L G H F  DY  + K
Sbjct: 175 ARYLTLPEVNKQTTVPMLCLYGKEDDAPLHLCPEVKQPNVTVMELSGGHSFDDDYDKVVK 234

Query: 446 VI 447
           +I
Sbjct: 235 LI 236