Pairwise Alignments

Query, 907 a.a., hypothetical protein from Xanthomonas campestris pv. campestris strain 8004

Subject, 332 a.a., Predicted integral membrane protein from Pseudomonas stutzeri RCH2

 Score = 91.7 bits (226), Expect = 7e-23
 Identities = 81/309 (26%), Positives = 131/309 (42%), Gaps = 10/309 (3%)

Query: 66  SGWRRALPVI---ISLAILAMALHALSSQFTDHGYRQIRQAFRALGAGQIALTLLLGLSS 122
           SGWRR  P+I   ++    A+ +  L     +  ++++    R   A  + +       S
Sbjct: 11  SGWRRRWPLIKKILTYVFFALVVGLLIGLARNLDWQEVYNTLRNYKAQTLWMAGAAAFGS 70

Query: 123 YACLVGFDWVGLKRTGKRLHPARVGITAFMAHAVGQTLGFAALTGG-AVRLRGYGSVGLT 181
           Y     FD +G +     L   ++    F+ +A    L  +A  GG A+R R Y   GL 
Sbjct: 71  YVVYCFFDVLGKRYARHDLPIRQILPVTFVCYAFN--LNLSAWVGGIALRFRLYSRFGLK 128

Query: 182 LAEIGQVVLMSTLGFIFGAWVLLGIALMLEPEAAARALPIAAEGIRIAGIALLAGYLAML 241
            ++I +V  MS L    G   L G+   +       +  I    +RI G  LL   L  L
Sbjct: 129 PSQITRVFTMSILTNWLGYMWLAGMIFAMGWIKPPASWEIGFTALRILGGGLLVACLVYL 188

Query: 242 VLVG-RHGREFGIRSHRFWLPDRTTVLGVTALSVVELGLAAAAFYVLLPPDPGTGYFGFI 300
            L G    R + IR H   LP     L    L      L A   Y +        Y   +
Sbjct: 189 GLCGFSKRRSWTIRGHEIQLPSLRLALIQLVLGAANWSLMALVVYYMFSQK--AAYPEVL 246

Query: 301 GIWLVAVVAGLISTVPAGLGVFEWSLLKLL-PHVTPAAVLAAALAYRVTYYIVPLLISVA 359
           GI +++ +AG+++ +PAGLGV E   + +L   ++  A++   + YRV Y+++PLL +  
Sbjct: 247 GILMISSIAGVVTHIPAGLGVIEAVFVAMLADEMSKGAIVGGLIGYRVIYFLIPLLFATL 306

Query: 360 MAAATGLRA 368
           +      RA
Sbjct: 307 VYVVLEARA 315