Pairwise Alignments

Query, 907 a.a., hypothetical protein from Xanthomonas campestris pv. campestris strain 8004

Subject, 875 a.a., hypothetical protein (NCBI) from Rhodospirillum rubrum S1H

 Score =  483 bits (1243), Expect = e-140
 Identities = 299/865 (34%), Positives = 447/865 (51%), Gaps = 16/865 (1%)

Query: 46  LSADPVAPMTDTPVPSE----ATASGWRRALPVIISLAILAMALHALSSQFTDHGYRQIR 101
           L A P     +TP        A  +  R AL     + +LA+   A+     +  ++ + 
Sbjct: 6   LPAQPAEGKAETPPHWTSGIVAVLAARRHALASAAGVVVLAVLSFAIYHMAREVDFQDVL 65

Query: 102 QAFRALGAGQIALTLLLGLSSYACLVGFDWVGLKRTGKRLHPARVGITAFMAHAVGQTLG 161
            A R      +   +LL   S+  L  +D   L   G ++    V +T+F ++AVG T G
Sbjct: 66  AALRGTPWHAVGWAVLLTAVSFLSLSVYDVEALAHIGHKVPYPVVALTSFCSYAVGNTAG 125

Query: 162 FAALTGGAVRLRGYGSVGLTLAEIGQVVLMSTLGFIFGAWVLLGIALMLEPEAAARALPI 221
           F  LTGGA+R R Y  +GL    +G+VV+  T  F  G   +  ++L++  +  A  L +
Sbjct: 126 FGPLTGGAIRFRFYAPMGLEPECVGKVVVFVTAAFGLGLTAVTALSLLVAADDVAGVLSL 185

Query: 222 AAEGIRIAGIALLAGYLAMLVLVGRHGREFGIRSHRFWLPDRTTVLGVTALSVVELGLAA 281
               ++   +  + G LA++V   R   +  +      LP    +LG  A + V++   A
Sbjct: 186 PPLALQGGAVLAIGGLLALVVRASRPESKVALGRVALRLPRPRIMLGQFAATAVDIVACA 245

Query: 282 AAFYVLLPPDPGTGYFGFIGIWLVAVVAGLISTVPAGLGVFEWSLLKLLPHVTPA-AVLA 340
              +VLLP + G G+  F+ ++ VA+  G++S VPAGLGVFE  ++  L  + P   +L 
Sbjct: 246 GILWVLLP-EIGLGFPAFVTLYAVAIGLGVLSHVPAGLGVFETIMIATLGRLAPMDQILG 304

Query: 341 AALAYRVTYYIVPLLISVAMAAATGLRAPVRASASTARTVWKTLRPWLPQILALAVFAVG 400
           A + YRV Y+I+PLL++  + +    R  +   A  A  V ++     P +++     +G
Sbjct: 305 ALVLYRVIYHILPLLLATVLVSIVETRRAMAGPA--ASKVVRSASQMAPPVISAMTLVLG 362

Query: 401 AALVIDGTLPTPRARQEVAP----LPLIETSHLLVSLGGMLLLLIGQGLQRRSHSAWVLA 456
           A L+  G  P      ++      LP++E++H L S+ G+ L+++ +GL  R   AW  A
Sbjct: 363 AMLIFSGVTPALPGDLDILDAWIALPIVESAHFLASVLGLALVIVARGLAFRLDGAWWAA 422

Query: 457 LGVCVLLPPLSLLRGSHISVSLSAALAAVALWAARREFYRQGALLDEAWSWRWLSNLGLV 516
           +    L   LS+L+   +  ++  ++  +AL A R EF R  +LL +  +  WL+ +  +
Sbjct: 423 IAAAALAVVLSVLKAVALGEAIVLSVLVLALLATRAEFSRPASLLHQTLTPPWLAAIATI 482

Query: 517 LVATFWLLFFVYSHVEYSNDLWWQFATSANAPRALRALLILCVGVILFGTARLLRG--GR 574
           +++ F LLF  Y  V+Y++DLWWQF  S  APR+LRALL + +G   F    LLR   GR
Sbjct: 483 VISAFVLLFLTYQGVDYTDDLWWQFEISNEAPRSLRALLAVSLGAGSFAIWNLLRPAPGR 542

Query: 575 RPMPPADAQALQALAPVLASSADTQACLALTGDKAFLRDEKGLGFVMMQRYGGSLISMGD 634
             +P    Q +     +L +     A L   GDK+ +  E G  F+M  R G S +++ D
Sbjct: 543 THLP--SPQEIDRALAILETQPMAAANLLRMGDKSLMFSEDGKAFIMYGRQGRSWVALFD 600

Query: 635 PVGPPEVARALIWRFREEADHMGLRPVFYQVGEKYWQTYLDMGLTLVKLGEEAIVPLEGF 694
           PVG  +    L+WRF E A   G R  FYQV  +    Y D GL+  KLGEEA +PL  F
Sbjct: 601 PVGARDSWPELVWRFVETARASGGRAAFYQVVPENLALYADAGLSAFKLGEEARIPLADF 660

Query: 695 TLEGRDRADLRQAWNRGKRGGLSFRMLQPEQVDAVMAELGEVSEQWLDEKAGEEKGFSLG 754
           +L G  R  LRQ  +R  R GL F +L P+++ A M  L E+S+ WL      EK FSLG
Sbjct: 661 SLSGSKRYGLRQTVSRCSRDGLVFSLLSPDEIAAEMDRLEEISDAWLASHRAREKRFSLG 720

Query: 755 SFDPDYLRRFPMAVAEAEGKIVAFANVWCAPAGGELSVDLMRHSAQAPKGTMDFLFIELF 814
           +FD  Y++   +AV     +IVAFA V       E ++DLMR   +AP+  M+FLFI L 
Sbjct: 721 AFDRSYVQSQTVAVLRRADQIVAFATVMTTALTEEATIDLMRFDDEAPRSAMEFLFIRLM 780

Query: 815 LWGHANGYTRFSLGMAPLSGLAEHRLAGRWNRFASLVARHGERFYGFSGLRRFKSKFAPT 874
               A GY R  LGMAPLSGL+    A  W+R    V  HGERFY F GLR FK+KF P 
Sbjct: 781 EHFKAAGYDRLHLGMAPLSGLSSSPAAPFWHRVGRAVFEHGERFYNFQGLRAFKAKFQPE 840

Query: 875 WRPRYLVAPGGMHLPAALLDVTRLI 899
           W+PRYL   GG++   AL D+  LI
Sbjct: 841 WQPRYLAVAGGLNPALALADIATLI 865