Pairwise Alignments

Query, 705 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Xanthomonas campestris pv. campestris strain 8004

Subject, 536 a.a., membrane protein from Herbaspirillum seropedicae SmR1

 Score =  320 bits (819), Expect = 1e-91
 Identities = 175/293 (59%), Positives = 220/293 (75%)

Query: 407 KAIADGDLTARMHGNQQGVFARMRDDANATVQRLTDIVGDITLAAQTIRTASAEIAAGNA 466
           + +A+GDL++ +    +    ++        Q L  IV ++     TI TAS+EIAAGN 
Sbjct: 227 RCVAEGDLSSEIAVTSRDETGQLLQSLKDMNQSLRGIVSNVRSGTDTISTASSEIAAGNL 286

Query: 467 DLAQRTEQQAANLEETAASMEELTSTVRQNADTAQQASRGAQAAADIAGRGGDMVGSVVE 526
           DL+ RTEQQA++L ETA++MEEL STVRQNAD A+QAS+ A +A+ +A +GG +V  VV+
Sbjct: 287 DLSSRTEQQASSLAETASAMEELISTVRQNADNARQASQLANSASAVAEQGGGVVSQVVD 346

Query: 527 TMGEIEVSSKKIAEIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRALAQR 586
           TMG I  SS+KI +IISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVR LAQR
Sbjct: 347 TMGAINASSRKIVDIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQR 406

Query: 587 SAGAAKEVKHLIDASVDSVERGSARVEQAGQTMQQIVQSVQQVTTLIAEISAASREQSSG 646
           SA AAKE+K LI+ SV  V+ GS  VEQAG TMQ++V SV++VT ++AEISAAS EQ+ G
Sbjct: 407 SASAAKEIKELINDSVGKVDDGSRLVEQAGNTMQEVVSSVRRVTDIVAEISAASTEQTHG 466

Query: 647 IEQVARTVNDMDETTQRNAALVEEASAAARAMEEQAVELSEAVSVFRLDARRP 699
           IEQ+   +  MD+ TQ+NAALVEEA+AAA +M+ QA  L + VSVFRL  R P
Sbjct: 467 IEQINLAITQMDQVTQQNAALVEEAAAAAASMQTQAGRLMQMVSVFRLSEREP 519



 Score = 50.4 bits (119), Expect = 2e-10
 Identities = 103/451 (22%), Positives = 175/451 (38%), Gaps = 67/451 (14%)

Query: 73  LIRGRDPAQLDKHLSAFRAQGSK----VQAGTEALTKTLSDAQARALAQEFAKAH-LTLQ 127
           + +  DPA L  + +A  A  SK     Q   EAL   LS  + +AL Q+  +   L L 
Sbjct: 73  IAKSSDPA-LGPYFAAEVAASSKSSGEYQKQVEAL---LSTPEEKALFQKIGELRKLYLS 128

Query: 128 AHYEAALGKFADAGYDT-QVGDALVKGQDRAPSQALEALVT-RAKTLADAAVLASAQAAQ 185
           +  E    K A    +  ++ D +      A    +  LV  + K + D A    A AA+
Sbjct: 129 SRDEINKAKAAGNTEEAMRILDQVFVPNATAYQDTMRKLVDFQRKEMDDTAREIDAIAAK 188

Query: 186 QK---LVYAGVATIAAALCLVVVLGWWIRRSIVRPIEIVARAARSVAAGDLAARAVIGNR 242
            +   LV  G+      L L +V   ++   I +P+      +R VA GDL++   + +R
Sbjct: 189 SRTLILVLEGLI-----LLLGIVFARYLTLGITKPLHRAVDVSRCVAEGDLSSEIAVTSR 243

Query: 243 DEIGLLGQAM-----------------TQVVSTL-ADVSSAQADMAQRHEAGEMSYRMDA 284
           DE G L Q++                 T  +ST  +++++   D++ R E    S    A
Sbjct: 244 DETGQLLQSLKDMNQSLRGIVSNVRSGTDTISTASSEIAAGNLDLSSRTEQQASSLAETA 303

Query: 285 DAFPGAYGRMVGDT-NGLVGAQVGLIGDMLQVMQHYAVGDMSVDMPRLPGEKARITEAMD 343
            A       +  +  N    +Q+      +       V  +   M  +     +I + + 
Sbjct: 304 SAMEELISTVRQNADNARQASQLANSASAVAEQGGGVVSQVVDTMGAINASSRKIVDIIS 363

Query: 344 TT-----KHNLAAINGEIRGLVEAAAAGDFATRGNAQAYQFEFRGMVDGLNGLMHNVDHN 398
                  + N+ A+N      VEAA AG+   RG        F  +   +  L       
Sbjct: 364 VIDGIAFQTNILALN----AAVEAARAGE-QGRG--------FAVVASEVRTLAQRSASA 410

Query: 399 LGELSQLLK----AIADGDLTARMHGNQQGVFARMRDDANATVQRLTDIVGDITLAAQTI 454
             E+ +L+      + DG       GN          +  ++V+R+TDIV +I+ A+   
Sbjct: 411 AKEIKELINDSVGKVDDGSRLVEQAGNTM-------QEVVSSVRRVTDIVAEISAASTEQ 463

Query: 455 RTASAEIAAGNADLAQRTEQQAANLEETAAS 485
                +I      + Q T+Q AA +EE AA+
Sbjct: 464 THGIEQINLAITQMDQVTQQNAALVEEAAAA 494