Pairwise Alignments

Query, 249 a.a., 23S rRNA (guanosine-2'-O-) -methyltransferase rlmB (EC 2.1.1.-) from Xanthomonas campestris pv. campestris strain 8004

Subject, 247 a.a., 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB from Vibrio cholerae E7946 ATCC 55056

 Score =  236 bits (603), Expect = 2e-67
 Identities = 121/243 (49%), Positives = 166/243 (68%), Gaps = 1/243 (0%)

Query: 5   NQWIVGVNAVASSVENDADNVREVLIEAGSKNPRLTEIEEQARRKGIDVRRVNTQALDGV 64
           N+ I G++AV + ++ D     E  +  G ++ RL  +  +  R G+ ++ ++ +ALD  
Sbjct: 3   NELIYGIHAVNAVLQRDPARFVEAYVLKGRQDDRLLPVLNELMRLGVSIQEMSRKALDDK 62

Query: 65  GGQVRHQGVAARYAAARLWAENELEGLVEAAQGRALVLILDGVQDPHNLGACLRSAAAAG 124
                HQG+ AR   AR   EN+L+ ++ A   + L+L+LDGV DPHNLGACLR+A AAG
Sbjct: 63  AEGANHQGLIARVKPARQLNENDLDDIL-AQHEQPLLLVLDGVTDPHNLGACLRNADAAG 121

Query: 125 VTAVVIPKDKSATVNATVRKTSAGAADRIPVVAVTNLARCLRDLQKQGVWLYGLAGEAEA 184
           V AV++PKDKSA + ATV K + GAA+ +P+V VTNLAR +R LQ++GVW  G AGEA  
Sbjct: 122 VAAVIVPKDKSAPLTATVSKVACGAAETVPLVRVTNLARTMRALQEKGVWFVGTAGEATH 181

Query: 185 SLYSVDLRGNVGLVLGGEGDGLRRLTREHCDGLVKIPMPGDIESLNVSVATGVTLFEAVR 244
            +Y   L G++ +V+G EGDG+RRLTRE CD L+KIPM G + SLNVSVA GV LFEAVR
Sbjct: 182 DIYQSKLTGSLAIVMGAEGDGMRRLTRETCDDLIKIPMAGSVSSLNVSVACGVCLFEAVR 241

Query: 245 QRL 247
           QR+
Sbjct: 242 QRM 244