Pairwise Alignments

Query, 333 a.a., Mobile element protein from Xanthomonas campestris pv. campestris strain 8004

Subject, 269 a.a., Integrase catalytic region (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  201 bits (512), Expect = 1e-56
 Identities = 101/250 (40%), Positives = 149/250 (59%)

Query: 78  GASERRALAVIGMSASALRYCPREDRNGELRERICALAHRHRRYGVGMIYLKLRQEGRIV 137
           G S+RRA   + +  S++RY      + E R  + A+A   RR+G   I++ L ++G ++
Sbjct: 9   GVSQRRAGKALAVDRSSVRYRSVRPDDAEARAAMKAVAAERRRFGYRRIHVMLERQGIMM 68

Query: 138 NYKRVERLYREQQLQVRRRKRKKVPIGERQPLLRPSQANQVWSMDFVFDRTAEGRVIKCL 197
           N K++ RLYRE++LQVRRR  +K  +G R P+L P   NQ WS+DFV D   +GR  + L
Sbjct: 69  NLKKLRRLYREEKLQVRRRGGRKRALGTRWPMLVPDAPNQHWSLDFVSDALTDGRRFRVL 128

Query: 198 VIVDDATHEVVAIEVERAISGHGVTRVLDRLAHSRGLPKVIRTDNGKEFCGKAMVAWAHA 257
            +VDD + E +A+  + ++SG  V R LD L   RG P ++ +DNG E    A+++W   
Sbjct: 129 AVVDDYSRECLALVADTSLSGLRVVRELDALMLRRGQPAMVVSDNGTELTSVAVLSWCQR 188

Query: 258 RNVQLRLIQPGKPNQNAYVESFNGRLRDECLNEHWFPTLLHARTEIERWRREYNEDRPKK 317
             ++   I PGKP QN +VESFNGR RDE LNE  F +L  AR +I  W+ +YN  RP  
Sbjct: 189 TGIEWHYIAPGKPMQNGFVESFNGRFRDELLNESLFSSLADAREQIRAWQHDYNHHRPHS 248

Query: 318 AIGGMTPAAY 327
            +G + P  +
Sbjct: 249 GLGNIPPVEF 258