Pairwise Alignments

Query, 540 a.a., Malate synthase (EC 2.3.3.9) from Xanthomonas campestris pv. campestris strain 8004

Subject, 528 a.a., malate synthase from Herbaspirillum seropedicae SmR1

 Score =  471 bits (1213), Expect = e-137
 Identities = 248/515 (48%), Positives = 331/515 (64%), Gaps = 8/515 (1%)

Query: 28  GQAELLPAAALALLVSLHRAIEPGRQQRLAQRRSRQAAFDAGQLPDFRTDTRAIRASDWR 87
           G   +L   AL+L+  L RA E  RQ+ LA R  R    DAG+ PDF  +T +IR  DW+
Sbjct: 19  GYENILTFEALSLVAKLSRAFEGRRQELLAARAERVKRLDAGERPDFLKETESIRTGDWK 78

Query: 88  VAELPAALQDRRIEITGPTDPKMVINALNSGAKVFMADFEDSTAPTWRNLLAGQRTLAAA 147
           +A +P AL+ RR+EITGP + KMVINA NSGA  +M DFEDS +P W N ++GQ  L  A
Sbjct: 79  IAPIPEALKCRRVEITGPVERKMVINAFNSGADSYMTDFEDSNSPVWDNQISGQINLYDA 138

Query: 148 VRGELTFDAPNGKHYALRPEHERAVLIVRPRGWHLDEKHVLIDGQPMAGGLFDAALFAFH 207
           +R  ++ ++ NGK Y L  +   A L+VRPRGWHLDEKHV +DG+ ++GG+FD ALF FH
Sbjct: 139 IRRTISLES-NGKSYKLNDKI--ATLVVRPRGWHLDEKHVTLDGKRISGGIFDFALFLFH 195

Query: 208 NARTLMAKDRGPYLYLPKLQSMEEAALWETALAHIEAMLGLPHGQIKVTVLIETLPAVFE 267
           NA+  +A+  GPY YLPK++S  EA LW       +  +GLP G IK TVLIET+ A FE
Sbjct: 196 NAKEQLARGAGPYFYLPKMESHLEARLWNDIFVMAQNEIGLPQGTIKATVLIETITAAFE 255

Query: 268 MDEILHALRARIVGLNCGRWDYIFSYLKTFRAHPDRVLPERGQVTMTQPFLKAYSELLIK 327
           M+EIL+ LR    GLN GRWDYIFS +K F+   D  L +R +VTMT PF++AY+ LL+K
Sbjct: 256 MEEILYELREHSAGLNAGRWDYIFSCIKKFKNDKDFCLADRAKVTMTSPFMRAYALLLLK 315

Query: 328 TCHRRGAHAMGGMAAQIPINHDEAANEQAMARVRADKLREVSAGHDGTWVAHPALIPVAM 387
           TCH+RGA A+GGM+A IPI +D   N  AM  +  DK R+ + G+DG WVAHP L+  +M
Sbjct: 316 TCHKRGAPAIGGMSALIPIKNDPEKNAIAMQGIINDKRRDATDGYDGGWVAHPGLVEASM 375

Query: 388 AVFDEHM-PTAHQHHVLRNDVHI-TSDMLIATPPGGITRAGFEGNVEVCVRYLAAWLDGN 445
             F   +    +Q    R DV +  +D+L   P   IT AG   N+ V + YL AWL GN
Sbjct: 376 KEFVAVLGDKPNQFEKQRPDVDVKAADLLNFQPETPITEAGLRYNINVGIHYLGAWLAGN 435

Query: 446 GCVPIHNLMEDAATAEISRAQLWQWLHHGR-HLDDGTAIDQHLLDTTLRQLPARLGTTAG 504
           GCVPIHNLMEDAATAEISRAQ+WQW+   + +L+DG  +   ++   + +  A++   AG
Sbjct: 436 GCVPIHNLMEDAATAEISRAQVWQWIRSAKGNLEDGRKVTADMVRAMIPEELAKVKQVAG 495

Query: 505 VPGGARIAEAIGLLDQLSRAEELADFLTVPAYRLI 539
              G     A  + +++S +E  A+FLT+P Y  I
Sbjct: 496 --DGPTYDRAAKIFEEMSTSETFAEFLTLPLYEEI 528