Pairwise Alignments

Query, 368 a.a., hypothetical protein from Xanthomonas campestris pv. campestris strain 8004

Subject, 334 a.a., D-alanine--D-alanine ligase from Vibrio cholerae E7946 ATCC 55056

 Score =  153 bits (387), Expect = 6e-42
 Identities = 109/351 (31%), Positives = 176/351 (50%), Gaps = 29/351 (8%)

Query: 1   MRRIRVGLIFGGKSAEHEVSLQSARNILQALD-PQRFEPVLIGIDKQGQWHLSAQESFLL 59
           M +  + L+ GG S+EHE+SL SA  I Q L+    F  + + + K+G +          
Sbjct: 1   MTKTTILLLCGGGSSEHEISLVSANYIQQQLELTPEFHVIRVEMKKEGWF---------- 50

Query: 60  DADDPSRIALRHSGRGLAVLPGAASAQLRAVDAEQALAQIDVVFPIVHGTLGEDGSLQGL 119
                       S +G  V     SA L   ++++A   ID V P +HG  GE G +Q +
Sbjct: 51  ------------SEQGALVYLDTNSATL---NSDKASYPIDFVVPCIHGFPGETGDIQSM 95

Query: 120 LRMANLPFVGSGVLGSAVAMDKDMAKRVLRDAGLEVAPFACFTRHTAAQADVQTLIAQFG 179
           L +A +P++G G   SA + +K  +K       +   P+   T++T +  D         
Sbjct: 96  LELAGIPYLGCGPEASANSFNKITSKLWYDALDIPNTPYLFLTQNTPSSIDKAKQAFGHW 155

Query: 180 LPLFVKPANQGSSVGVSQVRSAEEFSAALELALRYDHKVLVEAAIAGREIECAVLG-NAT 238
             +FVK A QGSSVG  +V + ++ + A+E A  +  +VLVE A+  RE+E +    N  
Sbjct: 156 GSIFVKAARQGSSVGCYKVTTEDQIAPAIEAAFGFSEQVLVEQAVKPRELEVSAYEMNGK 215

Query: 239 PQASVCGEVVVHDA-FYSYQTKYIRDDGAATVIPAD-IDAHTQHRIQQCALQAYQALDCA 296
              S  GEV+  +  FYSY+ KY  +  A TV+ A+ +    +  IQ  A + +  +   
Sbjct: 216 LYISKPGEVIAPEGTFYSYEEKYSANSHARTVLEAENLTEKHKELIQTYAERVFIHMKLR 275

Query: 297 GMARVDVFLCADGRIVINEVNTLPGFTRISMYPKLWEASGLDYRSLVTRLI 347
            ++R+D FL  +G+I +NEVNT PG T ISM+PK+ E +G  +   + + +
Sbjct: 276 HLSRIDFFLTQEGQIYLNEVNTFPGMTPISMFPKMLEHNGHRFSEFLVQCV 326