Pairwise Alignments

Query, 624 a.a., Flagellar hook-associated protein FlgK from Xanthomonas campestris pv. campestris strain 8004

Subject, 686 a.a., Flagellar basal body rod protein:Protein of unknown function DUF1078 from Pseudomonas syringae pv. syringae B728a

 Score =  284 bits (726), Expect = 1e-80
 Identities = 207/690 (30%), Positives = 335/690 (48%), Gaps = 71/690 (10%)

Query: 1   MSIMSTGTSALIAFQRALSTVSHNVANINTEGYSRQRV--EFATRTPTDMGYAFVGNGAK 58
           MS++S G S + A   A++T+ +N AN++T GYSRQ+V    + +     G  ++G G  
Sbjct: 1   MSLISIGLSGINASSAAINTIGNNTANVDTAGYSRQQVLTTASAQIALGQGVGYIGTGTT 60

Query: 59  ISDVGRVADQLAISRLLDSGGELSRLQQLSSLSNRVDSLYSNTATNVAGLWSNFFDSASA 118
           +SDV R+ +    ++L  S    +     S  +++ D+L S++AT ++   ++FF     
Sbjct: 61  LSDVRRIYNSYLDTQLQSSTALSADALAYSGQASKTDTLLSDSATGISVQLADFFTKMQG 120

Query: 119 LSSNASSTAERQSMLDSGNSLATRFKQLNGQMDSLSNEVNSGLTSSVDEVNRLTQQIAKI 178
           ++++A+ +AER S L    +L+ RF  ++ Q+ + ++ VN+ L +   +VN LT  +A +
Sbjct: 121 IATSATQSAERSSFLTQAGALSARFNSVSSQLSTQNDNVNTQLDTFTKKVNELTTTLASL 180

Query: 179 NGTIGN-SIDNASAD-LLDQRDALVSKLVGYTGGTAVIQDGGFMNVFTAGGQALVVGTTA 236
           N  I   S  NA+ + LLD R   V +L    G   V+++ G  +++T  GQ+LV G T+
Sbjct: 181 NKQITQASAGNATPNTLLDSRSEAVRQLNELVG-VKVVENNGNFDIYTGTGQSLVSGGTS 239

Query: 237 AKLTTVADPYQPTKLQVAMQTQGQNVSLSPSSLGGQIGGLLEFRSNVLEPTQAELGRLAV 296
            K++    P  P +  V +        ++    GG IGGLL +R+ VL P   ELGR A+
Sbjct: 240 YKMSASPSPSDPLQYNVQIAYGQTQTDVTSVLTGGSIGGLLRYRNEVLVPATNELGRTAM 299

Query: 297 GMASSFNTAHSQGMDLYGALGGNFFNIGSPTTAANPKNTGTAALTASFSNLGAVDGQNVT 356
            ++   N+  +QG+D  G  G N ++  +   A   ++ G    +    NL    G    
Sbjct: 300 VLSDQVNSQMNQGIDSKGNFGSNLYSSINSADAITQRSIGKTTNSVGSGNLNVTIGDTSK 359

Query: 357 LSF--------DAGSWKATRTDTGSTVPLTGTGTAAD--PLVVNGVSMVVGGAP-ANGDK 405
           L+         D+ ++   R   G +V   G+G+ AD  P    G S+ + G   A GD 
Sbjct: 360 LTANDYEVTFSDSSNFSVRRLPNGESV---GSGSLADNPPKQFEGFSVSLNGNTLAAGDS 416

Query: 406 FLLQPTAGLAGSLSVAITDPSRIAAATPVKATATIANLGTGKISDVKVTNAQN------- 458
           F + PT   A  +SVA+TD   IAAA P+ ATA  +N GTG  +   V    +       
Sbjct: 417 FKVIPTRTGASGISVALTDAKDIAAAAPLTATAGSSNSGTGGFTQPVVNTKSDIYDSTQT 476

Query: 459 -----------PALLTPSSVEFIDANQYTI---------DGTGP---------------- 482
                      P  L   +V       YT+         D  G                 
Sbjct: 477 ADLRNALKDSTPMKLVMGAVNSSGVQSYTVIKANGGAVLDQNGNAIGGSIIQGQANTVKL 536

Query: 483 -FAYTPGQTISANGWSFALD----GAPKVGDTFGVGPMGAGSSDNGNAKLLAKVEDAKA- 536
              YT   T   +  +F L     G+P   DTF +G  G GSSDN NA  +  ++ AK  
Sbjct: 537 NVGYTDTTTTPNSKTAFELQMTISGSPVANDTFSIGLTGGGSSDNRNALAVVGLQTAKTV 596

Query: 537 --LNGGTVT-LNGALSGLTTSVGSAARAANYAADAQEVINDQAQASRDSISGVNLDEEAA 593
             +NGG  T L+G+ +   + VG+ A  +     A   +  QA++SRDS+SGV+LDEEA+
Sbjct: 597 GVINGGVGTSLSGSYASTVSVVGTLASQSKNDVTATAAVVSQAKSSRDSVSGVSLDEEAS 656

Query: 594 DMLKLQQAYQAAAQMISTADTIFQAILGAV 623
           +++K QQ Y A++Q+I  A TIF  ++ ++
Sbjct: 657 NLIKYQQYYTASSQIIKAAQTIFSTLINSL 686