Pairwise Alignments

Query, 327 a.a., Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) from Xanthomonas campestris pv. campestris strain 8004

Subject, 315 a.a., 23S rRNA pseudouridine(955/2504/2580) synthase RluC from Vibrio cholerae E7946 ATCC 55056

 Score =  268 bits (686), Expect = 1e-76
 Identities = 152/318 (47%), Positives = 205/318 (64%), Gaps = 14/318 (4%)

Query: 13  RVGVRILKVPEDRTGQRLDNFLLGQLKGAPRSLIYKLVRSGQVRVNGGRAKAERKLEGGE 72
           R  V+ + + ED  GQR+DNFL  QLK  P+S++Y+++R G+VRVN  R KAE KLE G+
Sbjct: 5   RTQVQFIDIDEDMAGQRIDNFLRNQLKNIPKSVVYRILRKGEVRVNKKRVKAEYKLEAGD 64

Query: 73  EVRIPPVRLTEEGDKAAPPS---AFQARLEAAIVFEDARLLALNKPTGVASHGGSGISFG 129
            VR+PPV +  + ++ APPS   +  A LE  IV+ED  LL LNKP+G A HGGSG+ FG
Sbjct: 65  VVRVPPVTVEVKENEPAPPSTKLSKVAELEHCIVYEDDHLLILNKPSGTAVHGGSGLHFG 124

Query: 130 AIETLRALRPN-QTLELVHRLDRDTSGLLIVAKKRSALTELQALMREDDRVDGRSITKRY 188
           AIE LRALRP  + LELVHR+DRDTSG+L+VAKKRSAL  LQA  RE      +++ K Y
Sbjct: 125 AIEALRALRPQARFLELVHRIDRDTSGILLVAKKRSALRHLQAQFRE------KTVQKYY 178

Query: 189 LTLLVGRMPDGVMSVDAPLHIGLRQGGERHVQVNAIGKPSLSHFRLLERRGGHSYCEVRI 248
             L++G        V+APL   L+      V+VN  GKPS + FR+LE+    +  +   
Sbjct: 179 YALVMGHWDAECKVVNAPL---LKNEVNSIVRVNPNGKPSETRFRILEKFAEATLVQASP 235

Query: 249 ETGRTHQIRVHAQHLGHAVAGDDKYGDPEVNKRLRDQVGLRRLFLHAASLEFALDNGKTP 308
            TGRTHQIRVH Q++GH +A DD+YGD   +     Q G+ RLFLHAA+++F     +  
Sbjct: 236 VTGRTHQIRVHTQYMGHPIAWDDRYGDRRFD-AYTAQFGIERLFLHAANIQFVHPASEKK 294

Query: 309 YVLNAPLAPELAEALDRL 326
             ++APL   L +AL ++
Sbjct: 295 LEIHAPLEAHLEQALTKM 312