Pairwise Alignments

Query, 446 a.a., Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) from Xanthomonas campestris pv. campestris strain 8004

Subject, 537 a.a., Exodeoxyribonuclease VII (NCBI) from Rhodospirillum rubrum S1H

 Score =  251 bits (640), Expect = 5e-71
 Identities = 184/485 (37%), Positives = 259/485 (53%), Gaps = 51/485 (10%)

Query: 9   LTPSQLNTLARDLLEGSFPLVWVEAELGNVTRPASGHLYFTLKDARAQIRCAMFKPKSTW 68
           L+ S+L+   +  +E +F  V V  E+       SGH Y  LKD +A I   +++     
Sbjct: 15  LSVSELSGALKRTIEEAFSRVRVRGEISQPKVAGSGHCYLRLKDDQAVIDAIIWRGTMAK 74

Query: 69  LKFQPREGLRVLARGRLTLYEARGDYQLVLDHMEEAGEGALRRAFEELRARLAAEGVFDA 128
           L  +P EGL V+A GRLT Y  R  YQ+V++ +E AGEGAL +  EE R RLAAEG+FDA
Sbjct: 75  LALRPEEGLEVIAIGRLTTYPGRSSYQIVIESLELAGEGALLKMLEERRRRLAAEGLFDA 134

Query: 129 ERKQPLPAHVRRLAVITSPSGAAVRDVLSVLARRFPLLEVDILPSLVQGDSAAAQITSLL 188
            RK+  P     + VITSP+GA +RD+L  LA RFP   V + P  VQG+ AAAQI + +
Sbjct: 135 GRKRRPPFLPSVIGVITSPTGAVIRDILHRLADRFP-RPVLVWPVAVQGEGAAAQIAAAI 193

Query: 189 QRADA------SGRYDVILITRGGGSLEDLWAFNDERLARAIAAAHTPVVSAVGHETDVS 242
              +A        R DV+++ RGGGSLEDL AFNDE + RA +A+  P++SAVGHETD +
Sbjct: 194 TGFNALPAGGPVPRPDVLIVARGGGSLEDLMAFNDEAVVRAASASAIPLISAVGHETDTT 253

Query: 243 LSDFAADVRAPTPSVAAELLVPDQRELVARVRRAQARLS----------QLQQHTLGQAM 292
           L D AAD+RAPTP+ AAE+ VP + +L+A+VR    RL           +L+   LG+ +
Sbjct: 254 LIDHAADLRAPTPTGAAEMAVPVRLDLLAQVRERGGRLDGATLRLIEERRLRIEGLGRGL 313

Query: 293 QHADRL----ALRL--RARSPQARLQLLQRRQEDAARHLRARMQ---HILERLQARVQRA 343
               RL    A RL  RA   +A L  L  R+ D   H  AR++    ++ R    ++RA
Sbjct: 314 PDLARLIGTFAQRLDDRAERLEAALPRLLDRRADGVFHTAARLRGPGEMIARKADALERA 373

Query: 344 QAGVQ-----------SHSPQR--HLAPLQQRLRAAHPQAAM-----------QRRLQQD 379
             G++           S   QR   L P Q     A    A+           ++ L + 
Sbjct: 374 GRGLETGLARGLREAASRLDQRADRLRPGQIARLVAEGSRALTTLAGRLDDLGRQTLVRR 433

Query: 380 HLHLRGLVRSLEAVSPLATVARGYAIVTRQADGSVVRSAAELTQGDRLRAQLADGSVTVV 439
              L GL   L+ +S    + RGYA+V R A G++V +A  LT+GD +     DG V   
Sbjct: 434 QDTLEGLGARLDNMSYRKVLERGYAVV-RDATGAIVPAARGLTKGDGVVLDFRDGRVAAT 492

Query: 440 VDTSE 444
           +  ++
Sbjct: 493 IGEAD 497