Pairwise Alignments

Query, 446 a.a., Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) from Xanthomonas campestris pv. campestris strain 8004

Subject, 462 a.a., exodeoxyribonuclease VII large subunit from Marinobacter adhaerens HP15

 Score =  358 bits (919), Expect = e-103
 Identities = 200/455 (43%), Positives = 287/455 (63%), Gaps = 15/455 (3%)

Query: 1   MADRTEQILTPSQLNTLARDLLEGSFPLVWVEAELGNVTRPASGHLYFTLKDARAQIRCA 60
           + D   + L+ S+LN  AR LLE SF  VWVE EL  ++RP+SGH YF+LKD + Q+RCA
Sbjct: 13  LQDTRPRALSVSELNHQARHLLESSFMQVWVEGELSGLSRPSSGHWYFSLKDRKCQVRCA 72

Query: 61  MFKPKSTWLKFQPREGLRVLARGRLTLYEARGDYQLVLDHMEEAGEGALRRAFEELRARL 120
           MF+  +  ++  P+EG +V  RG++TLYE RGD+Q++++H+E AG GAL++AFEEL+ +L
Sbjct: 73  MFRGMNQRIRTPPKEGDQVRIRGKVTLYENRGDFQIIVEHVEPAGLGALQQAFEELKRKL 132

Query: 121 AAEGVFDAERKQPLPAHVRRLAVITSPSGAAVRDVLSVLARRFPLLEVDILPSLVQGDSA 180
            AEG+F+   K+PLP+  R + V+TSP+GAA+ D+L+VLARR P + V + P+ VQG +A
Sbjct: 133 LAEGLFEQASKKPLPSLPRHIGVVTSPTGAAIHDILTVLARRCPAIPVTLYPTAVQGKAA 192

Query: 181 AAQITSLLQRADASGRYDVILITRGGGSLEDLWAFNDERLARAIAAAHTPVVSAVGHETD 240
            A I   ++ A   G  DV++I RGGGSLEDLW FN+E +ARAIAA   P VSAVGHE D
Sbjct: 193 TADIVRAIEAAQNHGVADVLIIGRGGGSLEDLWCFNEEAVARAIAACRIPTVSAVGHEVD 252

Query: 241 VSLSDFAADVRAPTPSVAAELLVPDQRELVARVRRAQARLSQ---LQQHTLGQAMQHADR 297
           V+++DF AD+RAPTPS AAE + PDQ + + ++R  + RLS    L    LG  + H   
Sbjct: 253 VTIADFVADLRAPTPSAAAEKISPDQSDWLKQLRDREFRLSNAMGLALKRLGTQLGH--- 309

Query: 298 LALRLRARSPQARLQLLQRRQEDAARHLRARMQHILERLQARVQRAQAGVQSHSPQRHLA 357
             L  R R P+  L    +R ++    LR  ++  L  +  R    +  +   SP R L+
Sbjct: 310 --LSARLRDPRRELLEKAQRMDELELRLRKAIRQRLTTVGVRNDHLRQRLVMQSPHRQLS 367

Query: 358 PLQQRLRAAHPQ--AAMQRRLQQDHLHLRGLVRSLEAVSPLATVARGYAIVTRQADGSVV 415
             Q  LR    +  + MQ+ L+Q   +L    ++L  VSPLAT+ RGY+IV R  +G+++
Sbjct: 368 DSQDALRRVSERLVSVMQQDLKQRRDNLEHAAQTLNVVSPLATLGRGYSIV-RDNNGNIL 426

Query: 416 RSAAELTQGDRLRAQLADG----SVTVVVDTSETG 446
           R A+ +  GD + A++A G     VT V    ETG
Sbjct: 427 RDASNVNPGDTISARVARGEMTAKVTSVKSAEETG 461