Pairwise Alignments

Query, 1464 a.a., Lhr-like helicases from Xanthomonas campestris pv. campestris strain 8004

Subject, 807 a.a., DEAD/DEAH box helicase from Lysobacter sp. OAE881

 Score =  100 bits (250), Expect = 5e-25
 Identities = 105/363 (28%), Positives = 166/363 (45%), Gaps = 54/363 (14%)

Query: 27  QIAAWPAIKAGRHTLVAAPTGSGKTLTAFLAAIDALIRDGLAQGGALPDQTRVIYVSPLK 86
           Q  AW A++ G   ++A  T SGK+L   L  + A          A   +++ +++ P K
Sbjct: 81  QAEAWHAVRRGEDVVIATATASGKSLCYLLPVLAA----------ASTQRSKALFLFPTK 130

Query: 87  ALSNDIHLNLEAPLHGIRAELLAQGLPDVPVRTAVRTGDTPQRERAQARRVPPHILVTTP 146
           AL+ D    L         EL A G  ++ VRT    GDTP   R QA R+   I+V+ P
Sbjct: 131 ALAQDQVAEL--------LELNAAG--NLGVRTFTFDGDTPGDAR-QAIRLHGDIVVSNP 179

Query: 147 ESLY--VLLGSASGRSALRHVRTVIVDEIHAVAADKRGSHLALTLERLQRLAEQPITRVG 204
           + L+  +L           ++R V++DE+H+      GSH+A  + RLQR+         
Sbjct: 180 DMLHQGILPHHTKWAQFFENLRYVVIDEVHSYRG-VFGSHVANVIRRLQRIC-------- 230

Query: 205 LSATQKPIDTVAQFLVGVGEDGAAAPCE-----IVDIGY-TRQRDLALALPPTPLSVVLS 258
                KP   +    +G  +  A A  E     + + G  +  + + L  PP     V++
Sbjct: 231 AFYGSKPQFILCSATIGNPKAHAEALTERDVTAVTESGAPSGDKHVLLWNPP-----VVN 285

Query: 259 NDQWLQVYAE-----VAALA-QQHRTTLVFVNTRRMAERAARHLGELLGKQ-----RVAA 307
            D  L+  A      +A L  +    TLVF  +R M E   ++L ++         R+ +
Sbjct: 286 PDLGLRASARSQSNLIARLTIKAGLKTLVFAQSRLMVEVLTKYLKDVFDNDPRKPARIRS 345

Query: 308 HHGSLSRETRLLAERRLKAGELTVLVATASLELGLDIGDVDLVCQLGSPRSIATFLQRAG 367
           + G      R   ER ++AG +  +V+T++LELG+DIG +D V   G P SIA   QR G
Sbjct: 346 YRGGYLPTERRETERAMRAGTIDGIVSTSALELGVDIGALDAVVLNGYPGSIAATWQRFG 405

Query: 368 RSG 370
           R+G
Sbjct: 406 RAG 408