Pairwise Alignments

Query, 1464 a.a., Lhr-like helicases from Xanthomonas campestris pv. campestris strain 8004

Subject, 871 a.a., ligase-associated DNA damage response DEXH box helicase from Ralstonia sp. UNC404CL21Col

 Score =  222 bits (566), Expect = 1e-61
 Identities = 259/894 (28%), Positives = 366/894 (40%), Gaps = 107/894 (11%)

Query: 10  PVVAAWFGRTFAAPTPAQIAAWPAIKAGRHTLVAAPTGSGKTLTAFLAAIDALIRDGLAQ 69
           P + AWF      P P Q   W A+  G   L+ A TG+GKT   +L A+  L +    +
Sbjct: 7   PDLDAWFAARGWTPMPFQRTVWSAMARGESGLLHATTGAGKTYAVWLGALQRLAQVR-GR 65

Query: 70  GGALPDQTRVIYVSPLKALSNDIHLNLEAPLHGIRAELLAQGLPDVPVRTAVRTGDTPQR 129
           G A P    V++++P++AL+ D    L      +                 +RTGDT   
Sbjct: 66  GNAPP--LSVLWLTPMRALAADTTRALTEAAQALAPHWTL----------GLRTGDTGSA 113

Query: 130 ERAQARRVPPHILVTTPESLYVLLGSASGRSALRHVRTVIVDEIHAVAADKRGSHLALTL 189
           ERA   R  P  LVTTPESL +LL  A  R AL  V  V+VDE H +  +KRG  + L L
Sbjct: 114 ERAAQSRRLPTALVTTPESLSLLLARADAREALGSVHVVVVDEWHELVGNKRGVQVQLAL 173

Query: 190 ERLQRLAEQPITRVGLSATQKPIDTVAQFLVGVGEDGAAAPCEIVDIGYTRQRDLALALP 249
            RL+  +   I   GLSAT   +  +A+ +  +G+ G  AP  +V     ++ ++   LP
Sbjct: 174 ARLRTWSPDLIVW-GLSAT---LGNLAEAMDALGDAGTPAPGTLVQGHLPKRMEIDTLLP 229

Query: 250 PTPLSVVLSNDQWLQVYAEVAALAQQHRTTLVFVNTRRMAE----RAARHLGELLGKQRV 305
                   +    + +   V    +  RT LVF+NTR  AE           E  G   +
Sbjct: 230 DGVGRFPWAGHLGMAMLPHVLEELESARTALVFLNTRSQAELWYQAVINARPEWAGL--I 287

Query: 306 AAHHGSLSRETRLLAERRLKAGELTVLVATASLELGLDIGDVDLVCQLGSPRSIATFLQR 365
           A HHGSL R TR   E  LK G L  +  T+SL+LG+D   V+ V Q+GSP+ +A  LQR
Sbjct: 288 ALHHGSLDRATRDWVETGLKQGLLKAVFCTSSLDLGVDFLPVERVLQIGSPKGVARLLQR 347

Query: 366 AGRSGHAVGGTPKARLFPQTRDELVECAALLDGIRRGELDALRFPIAPIDVLAQQIVAEA 425
           AGRSGHA G   +  + P    ELVE AA       G+++A   P  P+DVL Q +V  A
Sbjct: 348 AGRSGHAPGRPSRVTVVPTHSLELVEGAAARAAAMSGQVEARTSPHKPLDVLVQHLVTVA 407

Query: 426 ACEDWDEDALFALVRRAWPFATLSRATFDAVVRMLCEGFST--------RLGPRAGYLHR 477
               +  +AL   VRRAW +  L    +   +  + +G  +        R+ P    + R
Sbjct: 408 LGGGFVPNALLEEVRRAWAYRDLRDDEWQWALDFVRQGGHSLTAYPDYHRVVPDEHGVWR 467

Query: 478 DAVNRRLHARRGARMTALTSGGTIPETGDYSVVLEPQAENIGTVNEDFAVESLTGDVFQL 537
              + RL  R    +  + S  T+     ++         +G++ E F      GD F  
Sbjct: 468 -VPDARLARRHRMSIGTIVSDATMTVRWWHA----SGGGALGSIEEGFIARLHPGDNFLF 522

Query: 538 GNASYRILRVDADKVRVEDAKGAPPNIPFWLGEAPGRSDALSLAVSRLREEIATRLDGAR 597
                 ++RV      V  A G    +P W G     S  L+ AV         +LD A 
Sbjct: 523 AGRLLELVRVQDMTAYVRRATGKRAAVPRWNGGRMPLSTELAHAV-------VAQLDAAA 575

Query: 598 HAGAQAWLCDEVGLAAEPAQQLVEYLANACQALGAMPTQHCLVMERFFDATGGTQLII-- 655
           HA   +           P  Q    L        A+PT   LV E      G    +   
Sbjct: 576 HARFDS-----------PEMQAARPLLELQARWSALPTTATLVAETLQSREGWHLFLYPF 624

Query: 656 ---HSPYGSRINRAWGLALR--KRFCRTFN---FELQAAATEDAIVLSLSTSHSFALEEV 707
              H+  G      W  A R    F   FN    EL +A   D   L L++   F     
Sbjct: 625 AGRHAHLGLASLLGWRAANRTPATFSLAFNDYGLELLSATPIDWPAL-LASGELF----- 678

Query: 708 ARYLHSASAEHVLVQALLDA----PLFGVRWRWNA-TNAMALPRFSGGNKVAPQLQRMKS 762
                   A H L+Q +L +     L   R+R  A  + +    + G +K A QLQ   S
Sbjct: 679 --------ATHTLMQDVLASLNAGELAQRRFREIARVSGLVFQGYPGAHKSARQLQ--AS 728

Query: 763 EDLLATVFPDQVACAENLVGEREVPDHPLVAQTLEDCLHQSMD---SEGWLQVLRGLESG 819
             L   VF             R  P + L++Q   + L Q +D    E  L  +RGL+  
Sbjct: 729 SGLFYEVF------------RRHDPGNLLLSQAETEVLRQELDLDRIEAALIRMRGLQ-- 774

Query: 820 AITLVARDLAAPSPLAAEALNARPYAFLDDAPLEER--RTQAVQGRRYTPQSSD 871
            + L A  L  PSP     +  R    L    L +R  R  A   R   P+ +D
Sbjct: 775 -LQLCA--LKRPSPFGFPLMVERFREQLSTEKLADRIARMLAEAERAAGPEPTD 825