Pairwise Alignments

Query, 252 a.a., ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit from Xanthomonas campestris pv. campestris strain 8004

Subject, 272 a.a., Cytochrome c1 (NCBI) from Rhodospirillum rubrum S1H

 Score = 83.2 bits (204), Expect = 5e-21
 Identities = 84/281 (29%), Positives = 113/281 (40%), Gaps = 74/281 (26%)

Query: 20  VLFAGGALAAEGGAVQQAGNDLG--------DRASLQRGAQLFMNYCSGCHSLKYLRYSR 71
           VL  GGA  A  G V     D          D+  LQRG Q+F   CS CH +K + Y R
Sbjct: 15  VLAIGGAAQANEGGVSLHKQDWSWKGIFGRYDQPQLQRGFQVFHEVCSTCHGMKRVAY-R 73

Query: 72  MASDLGLSE---AEVMANLNFTG------------AKVGEHIEGTMPHD--AATKWFGKA 114
             S LG SE    E+ A   F                  +HI     +D  AA    G A
Sbjct: 74  NLSALGFSEDRIKELAAEKEFPAGPDDNGDMFTRPGTPADHIPSPFANDKAAAAANGGAA 133

Query: 115 PPDLTLIARVR--GTDWVYTYLKSFYLDQT-RPLGW-------------------NNKLF 152
           PPDL+L+A+ R  G +++Y+ L+ +  D    P  W                    N  F
Sbjct: 134 PPDLSLLAKARPGGPNYIYSLLEGYASDSPGEPAEWWVKQQQEKGLEVAFNEAKYFNDYF 193

Query: 153 PN--ASMPNPLWELQGLQQAQFGPPDKATGDRPVQALKLGQPGRQTPVEFDQTVRDIANF 210
           P    SMP PL +            D  T +    A K            DQ  +D+  +
Sbjct: 194 PGHAISMPPPLMD------------DLITYEDGTAATK------------DQMAQDVVAY 229

Query: 211 LEYAGEPAALKRQSMGVWVILFLALLTFIAYLLKKEYWKDV 251
           L +A EP    R+S+G+ V+LFL +LT +   LK   W+DV
Sbjct: 230 LNWAAEPELDARKSLGLKVLLFLGVLTAMLLALKLAIWRDV 270