Pairwise Alignments

Query, 352 a.a., Ribose operon repressor from Xanthomonas campestris pv. campestris strain 8004

Subject, 339 a.a., Ribose operon repressor from Pseudomonas fluorescens FW300-N2E2

 Score =  164 bits (416), Expect = 2e-45
 Identities = 106/334 (31%), Positives = 176/334 (52%), Gaps = 7/334 (2%)

Query: 19  VATINDIARMSGVSKKTVSRIINNSPLVRQDTREKVEALMREVGYAPDPLARGLAFRRSF 78
           +ATI D+A ++G+S  TVS ++N +  V ++ R KVEA +  + Y P  +AR L  + + 
Sbjct: 1   MATIKDVAALAGISYTTVSHVVNKTRPVSEEVRLKVEAAIERLDYVPSAVARSLKAKTTA 60

Query: 79  LIGMVYDNPTAQYIVDMQYGALDALRGSSFELVVHPCDSRSPGYIEGVRRFAQAQKLHGV 138
            IG++  N    Y  ++  G  D    + + +++   D  +P       R    +++ G+
Sbjct: 61  TIGLLVPNSLNPYFAELARGIEDYCERNGYCVILCNSDD-NPDKQRSYLRVLLEKRIDGL 119

Query: 139 ILVPRASEDQALADMLAEIGCRYTRIASIALDTTSQTVITHDRD-GAAEAADYLLSLGHR 197
           I    A  D  LA+ L+ +      I    L+     ++  D + GA  A  +LL LGHR
Sbjct: 120 IFAS-AGGDVGLAEGLSNVRTPMV-IVDRGLEGVDADLVRIDHEYGAYLATRHLLELGHR 177

Query: 198 DIALVTGPSAYRSSIERTAGFADALTRRGIELPPERIVEAGYTFESGVAAAEKLLLGKKR 257
           DIA + GP+    +  R AG+  AL   GIELP ER++E+ +T   G  AA +LL+ ++ 
Sbjct: 178 DIAFIGGPANTSVAQMRLAGYCRALKEAGIELPVERMLESDFTSTGGYRAAAQLLV-QQP 236

Query: 258 PTAIFTGNDEMAAGIYKVALRAGINIPRQLSVIGYDDSSLASRLWPPLTSVRRHTRDTGR 317
           P+AIF  ND +  G+ + A    + +P +LSVIG+DD  ++  ++P LT+V +     G 
Sbjct: 237 PSAIFAANDMIGIGVLRAAAERNVRVPSELSVIGFDDIQMSRYVYPALTTVGQSILQLGE 296

Query: 318 TAAAMLIQPDNAPQLPTAS--VRPHLIVRDSCQP 349
            AA +L++    P L T    V P +++R+S  P
Sbjct: 297 MAAEVLLRRIATPGLATEQRIVTPSIVLRESTAP 330